Pairwise Alignments

Query, 389 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

Subject, 407 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score =  108 bits (269), Expect = 4e-28
 Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 21/343 (6%)

Query: 53  VRVFQPQQNAAGDTLRLPAHLEAWSKAPIHARVSGYLKDWKADIGTQVKAGQILAEIDSP 112
           V VF  +      T  LP  + A   A +  R+SG + +   + GT VK G +L  ID  
Sbjct: 43  VAVFTTKAEPLPITNELPGRITATRIAEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPA 102

Query: 113 DLDQQMAQTHARLIQEQANARLAQTTATRWQNLLASHSVSRQEADEKTSNAAAAKANAEA 172
               ++    A L + QA    A+ TA R   L  +   + Q+ D+  +  A A+A+   
Sbjct: 103 PFQVKVDSAEATLKRAQAVVDQAKRTADRQSRLKEAQVTAVQQYDDAIAALAQAEADVGI 162

Query: 173 AAADYARLSALESYKTIRAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQL-RLYV 231
           A A  A       Y  + AP +G I       G L+     +DP+  N+A   QL  +Y 
Sbjct: 163 AEAGLAEAKLNLQYTNVTAPISGRIGRALITEGALVNT---NDPQ--NLATIQQLDPIYA 217

Query: 232 PVPQNYAAVIH--------------PGLEAELTVPEHPGEHFKARLIGDSTAIDRRSGTL 277
              Q+   +I                  E +L + +      K RL+    A+D  +G +
Sbjct: 218 DFTQSATDLIRLRKALKDGQWMSAKNEAEVQLILDDGTPYALKGRLLFSEAAVDATTGQV 277

Query: 278 LAQFVADNPNGELLPGDYAEATLPIPADTHGVSIPASALIFRAQG-TQVAVLDAHNHVHL 336
             +    NPN +LLPG Y    +    +   +++P  A+     G +QV V++A N V  
Sbjct: 278 TLRGEFPNPNNDLLPGMYVRVQIQQGLEKDAITVPQQAVQRNNAGQSQVYVVNADNKVEF 337

Query: 337 QTIHIGLDLGERLVIDQGLKPVDRVVDNPPDALREGDPVQLAD 379
           + + +G  +GER  +  GLKP ++V+      +  G PVQ +D
Sbjct: 338 RNVTLGRTVGERWQVTSGLKPGEKVIVEGFQKVGPGAPVQPSD 380