Pairwise Alignments

Query, 1073 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

 Score =  391 bits (1005), Expect = e-112
 Identities = 287/1064 (26%), Positives = 496/1064 (46%), Gaps = 59/1064 (5%)

Query: 4    LVKTALQKPYTFIVLAIFICIIGPMAALRTPTDVFPDIGIPVVAVVWQYNGLSPDAMAGR 63
            L + ++  P    ++ + I ++G  +  R   D +P+  +PVV V   Y G SP+++   
Sbjct: 3    LTRISINHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVESE 62

Query: 64   VIYTYERSLSTTVNDIEHIESQSLPGMGIVKIFFQPGVDIRTANAQVTAVSQTVLKQMPP 123
            +    E +L+T +  I+ I S+S  G  IV + F+  VD + A  +V      +  + P 
Sbjct: 63   ISRPIEAALNT-IGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQEVRDRVARLETKFPD 121

Query: 124  GITPPLILNYSASTVPILQMAFSSPSLSEAKIRDLVQNNIRLPLSALPGLAMPTPMGGKQ 183
            G+  P +  Y      IL +A SS S +  +I  L    I   LS + G+   + +G  +
Sbjct: 122  GVATPQVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGSSE 181

Query: 184  RQITLDLDPQALAAKGLSAQDVGNALALQNQIIPVGTAKLGPNEYTILLNNSPKAIDELN 243
            RQ+ + +DP  L A GL+   V  A+  +NQ    GT   G N+  + +          N
Sbjct: 182  RQVLVVVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSGFN 241

Query: 244  DLPIKTVDGALITIGQVAHVRDGSPPQTNIVRVDGHRAVLMPALKNGSISTLSIIDGIRQ 303
             + +   +G  + + +VA + D     T++    G   + +  +K    +T+ +   +R+
Sbjct: 242  RIIVAQRNGYPVYLSEVATILDTGAEVTSLANYQGQTTLGLHIVKVQGANTVEVASAVRR 301

Query: 304  MLPRIN-ETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLFLGSWRSTII 362
             +  +N E    +++ ++  D S  +   V  V +  +   +L+  ++ +FL SWRST+I
Sbjct: 302  EVSALNAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLNSWRSTVI 361

Query: 363  IAASIPLAVLSAIALLAVSGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKAVK 422
               ++P++V+   A +   G TLN+MTL  L+L++GIL+DDA V  ENI  HL+ GK   
Sbjct: 362  TGLTLPISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMGKDPV 421

Query: 423  TAILDGAAQIVGPAFVSLLCICIVFVPMFLLQGIAGYLFRPMALAVIFAMASSFILSRTL 482
             A LDG  +I      + LCI  VF+P+  + G+ G  F    + V  A+  S  +S TL
Sbjct: 422  RAALDGTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFVSFTL 481

Query: 483  VPTLAMFLLKPHVPEQGAGHHPEDEFINHHEGEQHTQQRNAVLQGVLNFQQGFERHFSNI 542
             P L+     P                      Q T +R    Q +  F Q FE     +
Sbjct: 482  DPMLSSVWCDPQ--------------------SQKTAKRGFFGQLIERFDQWFE----GL 517

Query: 543  RDTYHGLLTLALGNRKRFIVGFLACVLASFLLLPSLGQDFFPATDAGALALHVRLPLGTR 602
               Y  ++      RK  I   L   + S LL+P +G +F P  D G +++ +    G  
Sbjct: 518  ASRYRSVIYFTFDYRKTTIAIVLGMFVVSLLLVPRIGTEFLPPPDQGEVSISLEANEGAS 577

Query: 603  IEESAAAFDRIEARIREVIPAEELDTIVDNIGIPLSGIDMAYSSSGTIGPQDGDIQVTLK 662
            ++  AA   +IE  +RE          V +    ++  +M   +   +  Q     V   
Sbjct: 578  LDYMAAKVGQIERALREF-------NYVSSTYSTINSGEMRGFNKALVAVQ----LVHSS 626

Query: 663  KDHAPTADYVKKLREALPQSFPGSHFAFLPADISSQILNFGAPAPLDVKISGRSDEENRA 722
            +    TA+ +  +R  L      S  A L   +  +    G+  PL + I G  DEE R 
Sbjct: 627  QRRLKTAETLGPIRRRL------SRIAGLEISVGQRSEVVGSIKPLQLSILGDGDEELRR 680

Query: 723  YAVELERRLQHVPGIADLRIQQSTGYPSLQVNVDRLRANGLGITERDVTNSMVASLAGSS 782
             +  +   L  +PG  ++        P+L V V R  A+ LG++   + +++ + +AG  
Sbjct: 681  ISDHITSVLAAIPGATEIESSIEKLRPTLAVRVRREAASDLGVSIATIGDTLRSLVAGD- 739

Query: 783  QVAPTFWLNPANGVSYSIVAATPQYRLDSLPSLEALPVTGAGGQSQ------ILGGVASI 836
              A + W +P +G ++ +V   P    ++   L  LP+  A           +L  VA +
Sbjct: 740  --AISVWNSP-DGETHDVVVRLPAAGRENAAQLRNLPIATARMDDNGKPIMVLLDQVADV 796

Query: 837  SRVESPAVVTHYNIEPTLDLYANVQGRDLGGVARDVQKVLDDTAAMRPKGAVISLHGQID 896
                +PA +T  ++   + + +N++GR LG V  D++  +  T    P G  IS  G  +
Sbjct: 797  VESTAPAQITRKDLSRDIRISSNIEGRTLGDVVADLKAAM--TKMDIPVGFRISFGGDAE 854

Query: 897  ALHEAFSGLSFGLLGAVVLIYLLIVVNFQSWADPFVIITALPAALAGIVWMLFLSGTSLS 956
             L E+ +     L  AV+ IY+++   F S+  P  II  +P +L G++  L  +G++L+
Sbjct: 855  NLTESTAYALQSLAMAVIFIYIILASQFGSFIQPIAIIMTMPLSLMGVLLGLLFTGSTLN 914

Query: 957  VPALTGAILCMGVATANSILVVSFCRERLAEHGDALKAAMEAGYTRFRPVCMTALAMIIG 1016
            + ++ G ++ MG+ T N+IL+V +    + E     ++  +AG  R RP+ MT LAMI G
Sbjct: 915  MFSMIGIMMLMGLVTKNAILLVDYSNLGVREGKSLRQSLADAGAVRLRPIVMTTLAMIFG 974

Query: 1017 MLPLAI----SEEQNAPLGRAVIGGLIFATIATLLFVPVVFSLI 1056
            MLP A+       Q AP+  A+IGGLI +T+ +L+FVPVV + +
Sbjct: 975  MLPTALGLGEGGAQRAPMAHAIIGGLISSTLLSLVFVPVVLTYL 1018