Pairwise Alignments

Query, 307 a.a., D-alanyl-D-alanine endopeptidase from Pseudomonas simiae WCS417

Subject, 316 a.a., D-alanyl-D-alanine endopeptidase from Vibrio cholerae E7946 ATCC 55056

 Score =  332 bits (850), Expect = 9e-96
 Identities = 170/289 (58%), Positives = 214/289 (74%), Gaps = 2/289 (0%)

Query: 9   SLLFAFTGTFAHAAETTQA--PRDTSKLQIASGSAMLVDLQTNKVIYSSNPDVVVPIASV 66
           SL+ A     A ++ TT+A   +   K ++++ SA+++DL+TN++IYS+NPD V PIASV
Sbjct: 16  SLIIAIPAHSADSSTTTKAGVKKTVKKQELSANSALVIDLKTNEIIYSNNPDAVKPIASV 75

Query: 67  SKLMTGLVVLEAKQNMDEYIDINIKDTPEMKGVFSRVKIGSEMPRKEMLLIALMSSENRA 126
           +KLMT +V L+AK  MD  + I IKD  EMKGV SRVKIGSE+ RK+MLL+ LMSSENRA
Sbjct: 76  TKLMTAIVTLDAKLPMDAKLPITIKDAKEMKGVHSRVKIGSEISRKDMLLLTLMSSENRA 135

Query: 127 AASLAHHYPGGYPAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLSKLLAAARHY 186
           AASLAHHYPGGY AFI AMNAKAKALGM +T +VEPTGLS  NVSTARDL  LL A++ Y
Sbjct: 136 AASLAHHYPGGYKAFIKAMNAKAKALGMKNTRFVEPTGLSAKNVSTARDLVVLLKASKKY 195

Query: 187 PLLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRANWDIKLTKTGFTNQAGHCLVLVTNM 246
           PLL +LS T +KTV+F KP YTL F NT+ L++  NW I LTKTGFTN AGHCLV+ T M
Sbjct: 196 PLLGKLSATDKKTVTFSKPRYTLDFRNTNRLVHNDNWKIDLTKTGFTNAAGHCLVMRTQM 255

Query: 247 GNRPVSLVILDAFGKFTHFADASRIRNWVETGKSGSVPDVALRYKADKN 295
           G R V+ V+LD  GK +   DA+R+R W+ETGK   +   A +YK  ++
Sbjct: 256 GRRQVAFVVLDTKGKLSPVGDANRLRTWIETGKVTPLSSEAKQYKKQRS 304