Pairwise Alignments

Query, 307 a.a., D-alanyl-D-alanine endopeptidase from Pseudomonas simiae WCS417

Subject, 303 a.a., D-alanyl-D-alanine endopeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  337 bits (863), Expect = 3e-97
 Identities = 164/269 (60%), Positives = 210/269 (78%), Gaps = 1/269 (0%)

Query: 35  QIASGSAMLVDLQTNKVIYSSNPDVVVPIASVSKLMTGLVVLEAKQNMDEYIDINIKDTP 94
           ++AS SA+LVD +TN+V+Y+SNP  VVPIAS+SKLMT +V L+AK  + E I + +KD P
Sbjct: 36  ELASYSALLVDTKTNEVLYASNPHQVVPIASISKLMTAMVTLDAKLPLGEKIAVEVKDNP 95

Query: 95  EMKGVFSRVKIGSEMPRKEMLLIALMSSENRAAASLAHHYPGGYPAFIAAMNAKAKALGM 154
           EMK V SR+++GS + RKE +L+ LMSSENRAA +LAHHYPGGY AF+ AMNAKAKALGM
Sbjct: 96  EMKNVVSRIRLGSTLSRKEAMLLTLMSSENRAATTLAHHYPGGYQAFVKAMNAKAKALGM 155

Query: 155 TSTHYVEPTGLSIHNVSTARDLSKLLAAARHYPLLSQLSTTKEKTVSFRKPNYTLGFSNT 214
           T+T +VEPTGLS+HNVSTA DL KLL AA+ YPLL QLS+T  K+V+F KP Y+L F NT
Sbjct: 156 TNTRFVEPTGLSVHNVSTAADLVKLLKAAQDYPLLGQLSSTPSKSVTFGKPRYSLAFYNT 215

Query: 215 DHLINRANWDIKLTKTGFTNQAGHCLVLVTNMGNRPVSLVILDAFGKFTHFADASRIRNW 274
           + L+N+ NWDI+LTKTGFT+ AGHCLV++T M  R V+ V+LD+FGK TH  DA R++ W
Sbjct: 216 NRLVNKDNWDIRLTKTGFTDAAGHCLVMLTKMAKRDVAFVVLDSFGKQTHLGDAGRLKKW 275

Query: 275 VETGKSGSVPDVALRYKADKNLKNRPNAA 303
           +ETGK   +PD A  YK ++  + R N A
Sbjct: 276 LETGKVSPLPDSAKTYK-EQRKRERNNKA 303