Pairwise Alignments

Query, 307 a.a., D-alanyl-D-alanine endopeptidase from Pseudomonas simiae WCS417

Subject, 399 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Klebsiella michiganensis M5al

 Score = 67.0 bits (162), Expect = 7e-16
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 28/269 (10%)

Query: 4   RLSLVSLLFAFTGTFAHAAETTQAPRDTSKLQIASGSAMLVDLQTNKVIYSSNPDVVVPI 63
           RL + +L  A   + A A +           QI + S +L+D  + KV+  +N D     
Sbjct: 8   RLLVTALSVAALSSAARADDLNIKTMIPGAPQIDAESWILIDYNSGKVLAENNADSRRDP 67

Query: 64  ASVSKLMTGLVVLEA----KQNMDEYIDIN----IKDTPEMKGV-FSRVKIGSEMPRKEM 114
           AS++K+MT  V+ +A    K    + + +         P  KG     +K G ++P  ++
Sbjct: 68  ASLTKMMTSYVIGQAMKAGKFKESDLVTVGNDAWATGNPVFKGSSLMFLKPGMQVPVSQL 127

Query: 115 LLIALMSSENRAAASLAHHYPGGYPAFIAAMNAKAKALGMTSTHYVEPTGLSIH-NVSTA 173
           +    + S N A  ++A +  G   AF++ MN    ALG+ +TH+    GL      S+A
Sbjct: 128 IRGINLQSGNDACVAMADYVAGSQDAFVSLMNNYVNALGLKNTHFQTVHGLDADGQFSSA 187

Query: 174 RDLSKLLAAARHYPLLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRAN--WDIKLT--- 228
           RD++ L+  A    + ++ +  KEK  +F          N    +NR    WD  L    
Sbjct: 188 RDMA-LIGQALVRDVPNEYTIYKEKEFTF----------NGIRQLNRNGLLWDNSLNVDG 236

Query: 229 -KTGFTNQAGHCLVLVTNMGN-RPVSLVI 255
            KTG T++AG+ LV     G  R +S V+
Sbjct: 237 IKTGHTDKAGYNLVASATEGQMRLISAVM 265