Pairwise Alignments

Query, 211 a.a., Clp protease ClpP from Pseudomonas simiae WCS417

Subject, 208 a.a., ATP-dependent Clp endopeptidase, proteolytic subunit ClpP from Vibrio cholerae E7946 ATCC 55056

 Score =  312 bits (799), Expect = 3e-90
 Identities = 154/205 (75%), Positives = 178/205 (86%)

Query: 5   SYIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQL 64
           SY ++N+       LVPMVVEQ++RGER+YDIYSRLLKERVIFL G VED+MANL+ AQL
Sbjct: 2   SYQEKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQL 61

Query: 65  LFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGA 124
           LFLE+ENPDKDI LYINSPGGSVTAGMSIYDTMQFIKPNVST C+GQACSMGAFLL  GA
Sbjct: 62  LFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGA 121

Query: 125 QGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERD 184
            GKR+ LPNSRVMIHQPLGGFQGQASDI+IHA+EIL I+ +LN L+A+H+G+ +E IERD
Sbjct: 122 PGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIERD 181

Query: 185 TNRDNFMSAEAAQAYGLIDAVINQR 209
           T+RDNFMSA+ A  YGL+DAV+  R
Sbjct: 182 TDRDNFMSADQAVEYGLVDAVLKHR 206