Pairwise Alignments

Query, 427 a.a., Clp protease ATP-binding protein from Pseudomonas simiae WCS417

Subject, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

 Score =  642 bits (1655), Expect = 0.0
 Identities = 329/425 (77%), Positives = 364/425 (85%), Gaps = 1/425 (0%)

Query: 1   MTDTRNGEDNGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEVQEAQAES 60
           MTD      + KLLYCSFCGKSQHEVRKLIAGPSV+ICDECVDLCNDIIREE+++   + 
Sbjct: 1   MTDKSKEGGSSKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKK 60

Query: 61  SAHKLPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKGDEVELGKSNILLI 120
            +  LP+P++I   LD YVIGQE AKKVLAVAVYNHYKRL   D   + VELGKSNILLI
Sbjct: 61  ESAALPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLI 120

Query: 121 GPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQM 180
           GPTGSGKTLLAETLARLL+VPFT+ADATTLTEAGYVGEDVENIIQKLLQKCDYDV KA+ 
Sbjct: 121 GPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAER 180

Query: 181 GIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV 240
           GIVYIDEIDKISRKS+NPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV
Sbjct: 181 GIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQV 240

Query: 241 DTRNILFICGGAFSGLEKVIQQRSTRG-GIGFSAEVRSKEEGKKVGESLREVEPDDLVKF 299
           DT  ILFICGGAF+GL+KVI+QR   G GIGF A+VRSK+  K + E   +VEP+DLVK+
Sbjct: 241 DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPEDLVKY 300

Query: 300 GLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKSV 359
           GLIPEF+GRLPV ATL ELDEAALIQIL EPKNALTKQYA LFE+E VDLEFR DALK++
Sbjct: 301 GLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFREDALKAI 360

Query: 360 AKRALERKTGARGLRSILEGVLLDTMYEIPSQSEVSKVVIDESVIEGKSKPLYIYENSEP 419
           A +A++RKTGARGLRSILE VLL+TMYE+PS  EVSKVVIDESVI G+S PL IY  +E 
Sbjct: 361 AAKAMKRKTGARGLRSILEAVLLETMYELPSMEEVSKVVIDESVINGESAPLLIYSANES 420

Query: 420 AAKAA 424
            A  A
Sbjct: 421 QAAGA 425