Pairwise Alignments

Query, 427 a.a., Clp protease ATP-binding protein from Pseudomonas simiae WCS417

Subject, 441 a.a., ATP-dependent protease ATP-binding subunit (RefSeq) from Shewanella loihica PV-4

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 75/231 (32%), Positives = 104/231 (45%), Gaps = 59/231 (25%)

Query: 179 QMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFL 238
           Q GIV++DEIDKI ++ D      DVS EGVQ+ LL L+EG   +       KH      
Sbjct: 247 QHGIVFLDEIDKICKRGDTSG--PDVSREGVQRDLLPLVEGCTVNT------KHGM---- 294

Query: 239 QVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEGKKVGESLREVEPDDLVK 298
            V T +ILFI  GAF                                   +  +P DL  
Sbjct: 295 -VKTDHILFIASGAF-----------------------------------QMSKPSDL-- 316

Query: 299 FGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEMEGVDLEFRTDALKS 358
              IPE  GRLP+   L+ L      +ILTEP  +LT+QY  L   EGV +EF    ++ 
Sbjct: 317 ---IPELQGRLPIRVELEALSANDFKRILTEPHASLTEQYVALMATEGVKVEFSESGIER 373

Query: 359 VAKRALE-----RKTGARGLRSILEGVLLDTMYEIPSQSEVSKVVIDESVI 404
           +A+ A +        GAR L +++E ++ D  +E   +S  S  VID   +
Sbjct: 374 IAQAAWQVNERTENIGARRLHTVMERLMEDLSFEASDKSG-STTVIDADYV 423



 Score = 87.4 bits (215), Expect = 8e-22
 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 14/124 (11%)

Query: 67  SPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKGDEVELGKSNILLIGPTGSG 126
           +P+EI   LD ++IGQ+ AK+ +A+A+ N ++R+        EV     NIL+IGPTG G
Sbjct: 5   TPREIVHELDSHIIGQQNAKRSVAIALRNRWRRMQLDAALRQEVT--PKNILMIGPTGVG 62

Query: 127 KTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKL------------LQKCDYD 174
           KT +A  LA+L   PF   +AT  TE GYVG++VE II+ L            + KC + 
Sbjct: 63  KTEIARRLAKLAKAPFIKVEATKFTEVGYVGKEVEQIIRDLTDAAVKLTREEQMAKCKFR 122

Query: 175 VEKA 178
            E+A
Sbjct: 123 AEEA 126