Pairwise Alignments

Query, 798 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 806 a.a., ATP-dependent protease LA protein from Sinorhizobium meliloti 1021

 Score =  940 bits (2429), Expect = 0.0
 Identities = 475/785 (60%), Positives = 597/785 (76%), Gaps = 7/785 (0%)

Query: 8   PLLPLRDVVVYPHMVIPLFVGREKSIEALEAAMTGDKQILLLAQKNPADDDPGEDALYRV 67
           P+LPLRD+VV+PHM++PLFVGREKSI ALE  M  DKQI+L+ Q N  DDDP   A+Y+V
Sbjct: 15  PVLPLRDIVVFPHMIVPLFVGREKSIRALEEVMGTDKQIMLVTQINATDDDPEPSAIYKV 74

Query: 68  GTIATVLQLLKLPDGTVKVLVEGEQRGAVERFMEVDGHLRAEVALIDEVEAPERESEVFV 127
           GTIA VLQLLKLPDGTVKVLVEG  R  +ER+   D    A    + E +    E E   
Sbjct: 75  GTIANVLQLLKLPDGTVKVLVEGRSRAEIERYTPRDDFYEAMAHALPEPDEDPVEIEALS 134

Query: 128 RSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQDILEIIDLSA 187
           RS++S+FE YV+L KK+  EV+   + I++ S+L DT+A+H+++KI +KQ++LE   +  
Sbjct: 135 RSVVSEFESYVKLNKKISPEVVGVASQIEDYSKLADTVASHLSIKIVEKQEMLETTSVKM 194

Query: 188 RVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSEEGHNEI 247
           R+E  L  ++ EI +LQVEKRIR RVK+QME++QREYYLNEQMKAIQKELGDSE+G +E+
Sbjct: 195 RLEKALGFMEGEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEM 254

Query: 248 EELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPWKAQTKVRL 307
            EL++RI    L K+A  KA AEL KL+QMSPMSAEATVVR+Y+DWL+ +PW  ++K++ 
Sbjct: 255 AELEERISKTKLSKEAREKADAELKKLRQMSPMSAEATVVRNYLDWLLGLPWGKKSKIKT 314

Query: 308 DLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAESIAN 367
           DL  AE +LD DH+GL++VKERI+EYLAVQ R  KI+GP+LCLVGPPGVGKTSLA+SIA 
Sbjct: 315 DLNHAEKVLDTDHFGLDKVKERIVEYLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAK 374

Query: 368 ATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKMGSD 427
           AT R+++RMALGGVRDEAEIRGHRRTYIGSMPG+++Q M K    NPLFLLDEIDKMG D
Sbjct: 375 ATGREYIRMALGGVRDEAEIRGHRRTYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKMGQD 434

Query: 428 MRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSNSMNIPPALLDRMEVIRLP 487
            RGDP+SALLEVLDPEQN  F DHYLEV+YDLS+VMF+ T+N++NIPP L+DRMEVIR+ 
Sbjct: 435 FRGDPSSALLEVLDPEQNSTFMDHYLEVEYDLSNVMFITTANTLNIPPPLMDRMEVIRIA 494

Query: 488 GYTEDEKINIAVKYLAPKQISANGLKKGEIEFEVETIRDIVRYYTREAGVRGLERQIAKI 547
           GYTEDEK  IA ++L PK I  + L+  E       +  +++ YTREAGVR  ER++ K+
Sbjct: 495 GYTEDEKREIAKRHLLPKAIRDHALQPNEFSVTDGALMAVIQNYTREAGVRNFERELMKL 554

Query: 548 CRKAVKEHALEKRFSVKVTADSLEHFLGVKKFRYGLAEQQDQVGQVTGLAWTQVGGELLT 607
            RKAV E    K   V+VTA+++  +LGV +FR+G AE+ DQVG VTGLAWT+VGGELLT
Sbjct: 555 ARKAVTEILKGKTKKVEVTAENIHDYLGVPRFRHGEAERDDQVGVVTGLAWTEVGGELLT 614

Query: 608 IEAAVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRAKSLGIPLDFHEKHDTHIHMPEGA 667
           IE  ++PGKG++  TG+L DVM ESI+AA + VRSRA   GI     +K D H+H+PEGA
Sbjct: 615 IEGVMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAIDFGIEPPLFDKRDIHVHVPEGA 674

Query: 668 TPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIK 727
           TPKDGPSAGV M TA+VS +TGIP+  DVAMTGEITLRG+VL IGGLKEKLLAA RGGIK
Sbjct: 675 TPKDGPSAGVAMATAIVSVMTGIPISKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIK 734

Query: 728 TVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQYAPEPL-------PDVAPEI 780
            V+IPEEN +DL +IPDN+K  L+I PV  + EV+  AL   PEP+       P   P +
Sbjct: 735 KVLIPEENAKDLADIPDNVKNSLEIIPVSRMGEVIAHALLRLPEPIEWDPASQPAALPSV 794

Query: 781 VAKDE 785
            ++DE
Sbjct: 795 DSQDE 799