Pairwise Alignments

Query, 798 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

 Score = 86.3 bits (212), Expect = 5e-21
 Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 24/221 (10%)

Query: 562 SVKVTADSLEHFLGVKKFRYGLAEQQDQVGQVTGLAWTQVGG--ELLTIEAAVIPGKGQL 619
           S +V  D L++F   K+++  ++  + ++G + GLA     G  ++  I   ++  K   
Sbjct: 477 SKQVAIDYLKNF---KRYKNIVSNDKPKIGVIHGLAVLGADGLGDVTKIITKIVKSKHPR 533

Query: 620 IKTGSL-GDVMVESITAAQTVVR--------SRAKSLGI----PLDFHEKHDTHIHMPEG 666
               ++ GD+   SIT A  + +        S AK+ G      LD  E H+ +I   + 
Sbjct: 534 TNLLNISGDLAKHSITLASALSKKLVSDGTLSIAKAKGEVAKEDLDLAE-HEIYIQFSQS 592

Query: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
            +  DG SA    C +++S+L  IP++ D  +TG + L G++LAIGG+ EK+ AA   G 
Sbjct: 593 YSKIDGDSATAAACLSIISSLLNIPLKQDFCITGSLDLNGEILAIGGVNEKINAAKEYGF 652

Query: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
           K VIIP+ N  D+ +      + +++ PV  ++E++ +A +
Sbjct: 653 KRVIIPQSNFEDVID-----PEGIEVIPVTRLEEIIPLAFE 688