Pairwise Alignments

Query, 401 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  135 bits (339), Expect = 3e-36
 Identities = 115/374 (30%), Positives = 189/374 (50%), Gaps = 17/374 (4%)

Query: 16  LPLSGLLALASAGFITILTEAMPAGLLPQIGEGLGVSPALVGQMVTVYALGSLLAAIPLT 75
           +PL+ + AL  A +    TE +  GLLP +   L ++  L G +V+VYALG    A  LT
Sbjct: 1   MPLA-IFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLT 59

Query: 76  LLTRGWRRRPLLLLAIGGFALVNSVTALSSHYGLTLVARFLAGVWAGLLWALLAGYASRM 135
            LT    R+PLLL  +  F   N+  ALS +Y + LVAR L+    G+ +++ +  A+ +
Sbjct: 60  ALTGRIERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADL 119

Query: 136 VAPHLQGRAIAVAMLGAPLALSLGVPAGTFLGAAVGWRLSFAIMTGLTLVLLAWARWQLP 195
           V  + +  AIA+  +G  +A+  GVP GT++G   GWR +F  ++GL +V  A     LP
Sbjct: 120 VPENRRASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLP 179

Query: 196 DFAGEPAGKRLGLHQVLTLPGIRPVLWVTFTYVLAHN---ILYTYIAPLL--VPAGIAAD 250
               + A   L L QV  L   R ++    T  L +    + +T++AP+L  V       
Sbjct: 180 GTLAKAAPASL-LDQVRVLGSGRLLIVFAMT-ALGYGGTFVAFTFLAPILQEVTGFSERS 237

Query: 251 IDQVLLVFGLAALLSIWMAGVLIDRWLRVLLLISCTMF-GLIALALAFWINLPAVIYVAV 309
           +  +L+++G+A  +   +AG  I     V  LI   +   L+ +  +F    P +  V +
Sbjct: 238 VSLILVLYGVAIAIGN-IAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTL 296

Query: 310 ALWG-LAFGGLPAL----LQTALAQSAGESADAAQSMLVTVWNLGIAGGGLVGGVLLQG- 363
           A  G L+F  +P L    +Q A+    G + D A ++ +  +NLGIA G  +GG+++   
Sbjct: 297 AALGFLSFANVPGLQLYVVQLAMEHRPG-AVDVASALNIAAFNLGIALGAWLGGMVVDSP 355

Query: 364 WGACAFAWAVVLLM 377
           +G  A  W   +L+
Sbjct: 356 FGLSATPWVGAILV 369