Pairwise Alignments

Query, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 339 a.a., putative transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 19/314 (6%)

Query: 31  LLLQYGLDPARLAEAGARLSIPRYMRLGHAAIQLTGDPGLGLRMGQLSRLSQGGLAGVTA 90
           LL + GL+ A       R+++ + + L   A   TGD  +GL    +   +   L   T 
Sbjct: 36  LLSRSGLN-ADTRSPNGRVTLDQIVCLYQLAAVETGDEMMGLWSRPVRPRALQHLL-TTV 93

Query: 91  AQAPNVREAARALTRFEALYGSNYRGQSSFVEDAEGAWLRFYSISPYNAYNRFVVDSIIA 150
            +A ++  A    + F  L   +Y+      + A    L   + +P   +   ++  +  
Sbjct: 94  REATSLPSALYRFSTFWNLLLDDYQFDLDDTDSALTLSLNPQTDAPVQRFGHMLILKLAH 153

Query: 151 GWLQQLSSLAQQPVQAQRIDIEFEAPEYSDQYSVL--GDVHFGAEANQLRLNQQTLALRN 208
           G +   S LA   V  + +D  F  P+++  Y+++      FG  A  +  +   L    
Sbjct: 154 GLM---SWLAGHEVPVKAVDFAFHRPDFNQDYAIIFPAPFQFGQPATAISFSPNALG--- 207

Query: 209 PQHCPSTWNL--LLQLCERELVQLT---RTRSLRERITRLLGPMLNGGREPDLEEVAARL 263
           P    ST +L   LQ   R+ +  +    T+SLR R    LG    G     L + A+ +
Sbjct: 208 PVQARSTSDLDRFLQNAPRDWIFTSSREHTQSLRVRT--YLGQ--TGWDAATLTQTASAM 263

Query: 264 KLPTWTLRRKLADEGTQFRAILNDTRRDLAMTYIRDTELAFGEIAYLLGFASAQAFQRAF 323
            +   TL R+L  +GT F+AI +  RRD+A+  ++    +   IA+ +GF+SA  F RAF
Sbjct: 264 HMTPRTLIRRLQADGTSFQAIKDALRRDIAIRDLQAGRKSVEAIAHDVGFSSAANFHRAF 323

Query: 324 RRWNNQTPGEFRRS 337
           +RW   TP  +RR+
Sbjct: 324 QRWTGSTPSSYRRT 337