Pairwise Alignments

Query, 168 a.a., RNA polymerase subunit sigma-24 from Pseudomonas simiae WCS417

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 57.0 bits (136), Expect = 2e-13
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 14/153 (9%)

Query: 14  RLRRFAVSLTRNASSADDLVQSTLERAIISWADKRVEGDLRAWLFSILYRQFLDAHRRTR 73
           +L R A S+ RN S A+D++Q    RA   + D R +  +  WL  I+  + L   R+ R
Sbjct: 32  KLYRIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTWLARIVINEALGRLRKGR 91

Query: 74  RYARMLEFF--------------TGRDDAQPSVERTVIAQSTLQAFDQLNTEQRALLLWV 119
           R  R+ ++               +G  D + ++ +  I     +  D L    R + +  
Sbjct: 92  RQMRLAKYMRQSQEAEIIAFPLNSGISDPEKTMAQRQILDLVERLTDDLPDTYRTVFVLR 151

Query: 120 SVEGLSYKEIAEILEVPIGTVMSRLSRARQALR 152
            +EGL  +E A +L +   T  +RL RAR+ L+
Sbjct: 152 VIEGLDNEEAAALLGLKPETARTRLHRARRILK 184