Pairwise Alignments

Query, 425 a.a., transporter from Pseudomonas simiae WCS417

Subject, 487 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2

 Score = 87.8 bits (216), Expect = 7e-22
 Identities = 110/416 (26%), Positives = 175/416 (42%), Gaps = 73/416 (17%)

Query: 8   LSGAVVLLLAVACGLSVANVYYAQPLL-DAMAETFA-MDHATVGIIIALTQVGYGVGLLL 65
           L+   +  L  + G SVA V  A P L +A+  +F  +    +  ++A+T +   VG L 
Sbjct: 26  LASLALSTLLASLGASVAAV--ALPTLAEALGASFQQVQWVVLAYLLAITTLIVSVGRL- 82

Query: 66  LVPLGDLLNRRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGLLAVVAQVL-VALAA 124
               GDL+ RR+L+++ + L TLA  + G + S + L+AG AL GL A +   L +AL  
Sbjct: 83  ----GDLMGRRKLLLAGIALFTLASAVCGLAPSLWLLVAGRALQGLGAAIMMALTLALVG 138

Query: 125 HLASPEQRGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILLWRV 184
                E+ G  +GL+ +   VG  L  S  G +    GW +++L++  L LL   L W  
Sbjct: 139 ETVDQEKTGSAMGLLATLSAVGTALGPSFGGMLISGFGWPALFLVNIPLGLLTLGLAWYS 198

Query: 185 LPSTE-PPRASGTY------------------------------------------GALI 201
           LP  E PP+  GT                                           G  I
Sbjct: 199 LPVREVPPKPEGTRFDVTGTLLLAVTLATYALSMTSGRGSFGGLNLALLLIALVGGGLFI 258

Query: 202 RS---VFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLSAPPLSLSHT---QIGLFG 255
           R+     S     KV RDR++++ L+ +A  ++ T ++  L   P  LS T        G
Sbjct: 259 RAQSRAVSPLIPLKVFRDRSLVSGLVTSA--LVATVMMATLLVGPFYLSITLALPAAFVG 316

Query: 256 LAGATG----ALGAAHAGRLADQGLAQWTSGTALLLMLLSWVAIGFTQSSLWAL--LLGV 309
           LA A G    AL    AGRL D+          L  M+L  + +     +L  +  L  +
Sbjct: 317 LALAVGPSVAALAGVPAGRLVDRFGVHPMRVAGLANMVLGCLMLSLVPPTLGTVGYLAAI 376

Query: 310 IVFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYML------FYSVGSALGSISATA 359
           +V  LG       + + + A     +  ++AG +       F++  S LG++ A A
Sbjct: 377 VVTTLGYAFFQTANNTAVMADVAAQRRGVIAGLLNLSRNLGFFTGASVLGAVFAAA 432



 Score = 31.6 bits (70), Expect = 6e-05
 Identities = 46/193 (23%), Positives = 73/193 (37%), Gaps = 10/193 (5%)

Query: 207 LFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLSAPPLSLSHTQIGLFGLAGATGALGA- 265
           LF     L   A+  +L     +V    + LP  A  L  S  Q+    LA         
Sbjct: 19  LFSPRWALASLALSTLLASLGASV--AAVALPTLAEALGASFQQVQWVVLAYLLAITTLI 76

Query: 266 AHAGRLADQGLAQWTSGTALLLMLLSWVAIGFTQSSLWALLLGVIVFDLGLQAVHVTSQS 325
              GRL D    +      + L  L+    G   S LW L+ G  +  LG   +   + +
Sbjct: 77  VSVGRLGDLMGRRKLLLAGIALFTLASAVCGLAPS-LWLLVAGRALQGLGAAIMMALTLA 135

Query: 326 LIYAVRPNAQSRLVAGYMLFYS-VGSALGSISATAMYAWGGWIGVCVLGAAINLLAL-VY 383
           L+       ++    G +   S VG+ALG      + +  GW  + ++   + LL L + 
Sbjct: 136 LVGETVDQEKTGSAMGLLATLSAVGTALGPSFGGMLISGFGWPALFLVNIPLGLLTLGLA 195

Query: 384 W----LATLPPKP 392
           W    +  +PPKP
Sbjct: 196 WYSLPVREVPPKP 208