Pairwise Alignments

Query, 425 a.a., transporter from Pseudomonas simiae WCS417

Subject, 412 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  408 bits (1049), Expect = e-118
 Identities = 216/390 (55%), Positives = 274/390 (70%)

Query: 2   RMSSSPLSGAVVLLLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYGV 61
           + S   LS ++ LL A A GL+VAN Y+A PLLD +A+  ++  AT+G ++  TQ+GYG+
Sbjct: 21  KRSKPGLSRSLTLLFAAASGLAVANAYFAHPLLDVIADDLSLPRATIGFVVGATQLGYGL 80

Query: 62  GLLLLVPLGDLLNRRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGLLAVVAQVLVA 121
           GL+LLVP+GDL++RR L++ Q LLS LA+L VG++ +   L   +   G  AV  Q  VA
Sbjct: 81  GLVLLVPVGDLVDRRNLVIIQSLLSVLALLCVGFAPTEEVLFPALIAMGFFAVATQAFVA 140

Query: 122 LAAHLASPEQRGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILL 181
            AA LA PE+RG VVG VTSGIV+G+LLAR+V+GA+ D+AGWR+VYLLSA  TL +  +L
Sbjct: 141 YAASLARPEERGAVVGTVTSGIVLGILLARTVAGAVVDIAGWRAVYLLSAAFTLAITAIL 200

Query: 182 WRVLPSTEPPRASGTYGALIRSVFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLSA 241
            RV+P+      + +Y  LI S+F+LF +E VLR RA+LA LIFA  T L TPLVLPLSA
Sbjct: 201 ARVVPAQPKSGPAVSYPKLIGSLFTLFLQEPVLRVRAILAFLIFADVTTLLTPLVLPLSA 260

Query: 242 PPLSLSHTQIGLFGLAGATGALGAAHAGRLADQGLAQWTSGTALLLMLLSWVAIGFTQSS 301
           PP SLSH  IGLFGLAGA GALGA+ AGR  D+G  Q  +G AL LML SW+ IG    S
Sbjct: 261 PPYSLSHAAIGLFGLAGAAGALGASRAGRWTDEGFGQRVTGVALTLMLCSWILIGLLPYS 320

Query: 302 LWALLLGVIVFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYMLFYSVGSALGSISATAMY 361
           +  L+ GV++ D GLQAVHV SQ LIY VRP AQSRL A YM+FYS GSALGS  +T +Y
Sbjct: 321 ILFLVTGVLLLDFGLQAVHVASQGLIYRVRPEAQSRLTAAYMVFYSTGSALGSSISTLVY 380

Query: 362 AWGGWIGVCVLGAAINLLALVYWLATLPPK 391
           A   W GV +LGA I   AL++W  TLP +
Sbjct: 381 ARWAWTGVSMLGAGIAAAALLFWAITLPKR 410



 Score = 33.9 bits (76), Expect = 9e-06
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)

Query: 286 LLMLLSWVAIGF--TQSSLWALLLGVIVFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYM 343
           LL +L+ + +GF  T+  L+  L+ +  F +  QA    + SL    RP  +  +V    
Sbjct: 103 LLSVLALLCVGFAPTEEVLFPALIAMGFFAVATQAFVAYAASL---ARPEERGAVVGTVT 159

Query: 344 LFYSVGSALGSISATAMYAWGGWIGVCVLGAAINLLALVYWLATLPPKPVS 394
               +G  L    A A+    GW  V +L AA  L         +P +P S
Sbjct: 160 SGIVLGILLARTVAGAVVDIAGWRAVYLLSAAFTLAITAILARVVPAQPKS 210