Pairwise Alignments

Query, 299 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 516 a.a., 2-isopropylmalate synthase from Vibrio cholerae E7946 ATCC 55056

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 67/288 (23%), Positives = 122/288 (42%), Gaps = 23/288 (7%)

Query: 15  RDGLQNEAQPISVSDKVRLVDALSAAGLSYIEVGSFVSPKWVPQMAGSAEVFAQIQRKPG 74
           RDG Q  +  ++V +K+++  AL   G+  IE G  VS    P    S +  A+  +   
Sbjct: 13  RDGEQALSASLTVKEKLQIAYALERLGVDIIEAGFPVSS---PGDFESVQTIAKNIKNSR 69

Query: 75  VTYGALAPNLRGFEDAVSAGVKEVAVFAAASEAFSQRNINCSISESLER-FAPIMAAAKQ 133
           V   AL+  +    DA +  +K    F   +   S   I+  + + L R +  ++A A +
Sbjct: 70  VC--ALSRAVAKDIDAAAEALKVAEAFRIHT-FISTSTIH--VQDKLRRSYDDVVAMAVK 124

Query: 134 NGVSVRGYVSCV-LGCPYEGQIAPEQVAAVARELYAMGCYEVSLGDTIGTGTAGATRRLF 192
                R Y   V   C   G+   + +  +       G   +++ DT+G         + 
Sbjct: 125 AVKHARQYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYTVPSEFGGII 184

Query: 193 EVVGAQVPR-DK--LAGHFHDTYGQAIANIYASLLEGISVFDSSIAGLGGCPYAKGASGN 249
           + +  +VP  DK  ++ H HD  G ++AN  A++  G    + +I G+G        +GN
Sbjct: 185 QTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVEGTINGIG------ERAGN 238

Query: 250 VATEDVVYLLNG----LGIETGIDLEALIGAGQQISSVLGRPTGSRVA 293
            A E++  ++      LG+ TGI  + +    + +S +   P  S  A
Sbjct: 239 CALEEIAMIIKTRQELLGVTTGIKHDEISRTSKLVSQLCNMPIQSNKA 286