Pairwise Alignments

Query, 299 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 514 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 30/295 (10%)

Query: 1   MSLPSHVRLVEVGPRDGLQNEAQPISVSDKVRLVDALSAAGLSYIEVGSFVSPKWVPQMA 60
           M LP  VR+ +   RDG Q     +    K+ +   LS  G+  IE G  VS +      
Sbjct: 18  MKLPEKVRVFDTTLRDGEQTPGVSLMPDQKMDIAKNLSEIGVDAIEAGFPVSSE------ 71

Query: 61  GSAEVFAQIQR--KPGVTYGALAPNLRGFEDAVSAGVKEVAVFAAASEAFSQRNINCSIS 118
           G  E    I          G      +  + A+  GV  +  F A S    +  +  S  
Sbjct: 72  GEQESIKNITSLGLDAEICGLARAVKKDIDVAIDCGVDSIHTFIATSPLHREYKLKMSKE 131

Query: 119 ESLERFAPIMAAAKQNGVSVRGYVSCVLGCPYEGQIAPEQVAAVARELY----AMGCYEV 174
           + ++     +   K++GV V           +  + A        +E+Y      G   +
Sbjct: 132 KIIDIAVESIEYIKEHGVIVE----------FSAEDATRTELDYLKEVYKKAVEAGADRI 181

Query: 175 SLGDTIGTGTAGATRRLFEVVGAQVPRDKLAGHFHDTYGQAIANIYASLLEGISVFDSSI 234
           ++ DT+G     +   L + +   + +  ++ H H+ +G A++N  A++  G      ++
Sbjct: 182 NVPDTVGVMVPNSMSYLIKELKNDI-KVPISVHCHNDFGIAVSNSVAAVEAGAEQVHCTV 240

Query: 235 AGLGGCPYAKGASGNVATEDVVYLLNGL-GIETGIDLEALIGAGQQISSVLGRPT 288
            GLG        +GN + E+ V  LN + GI T ++ + L    + +S   G  T
Sbjct: 241 NGLG------ERAGNASLEETVMTLNMVYGINTNVNTKMLTKLSKLVSHYTGIKT 289