Pairwise Alignments

Query, 299 a.a., hydroxymethylglutaryl-CoA lyase from Pseudomonas simiae WCS417

Subject, 492 a.a., 2-isopropylmalate synthase from Methanococcus maripaludis S2

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 40/299 (13%)

Query: 7   VRLVEVGPRDGLQNEAQPISVSDKVRLVDALSAAGLSYIEVGSFVSP-------KWVPQM 59
           V + +   RDG Q     +S S+K+ L   L   G++ IE GS ++        K V   
Sbjct: 2   VNIFDTTLRDGEQTPGVSLSPSEKLELAIKLDELGVNIIEAGSAITSKGEREAMKLVTGQ 61

Query: 60  AGSAEVFAQIQRKPGVTYGALAPNLRGFEDAVSAGVKEVAVFAAASEAFSQRNINCSISE 119
             +AE+ + ++  P              + A+S  V  V +    S+      +  S  E
Sbjct: 62  NLNAEISSFVRALP-----------VDIDAALSCDVDSVHLVVPTSDIHMTYKLRKSREE 110

Query: 120 SLERFAPIMAAAKQNGVSVRGYVSCVLGCPYEGQIAPEQVAAVARELYAMG----CYEVS 175
           +L+     +  AK +G+ V              + A        +EL+  G       + 
Sbjct: 111 NLKDAMHAVEYAKDHGLIVE----------LSAEDATRSDVEFLKELFLKGEELKADRIC 160

Query: 176 LGDTIGTGTAGATRRLFEVVGAQVPRDKLAGHFHDTYGQAIANIYASLLEGISVFDSSIA 235
           + DT+G  T      L + +   + +  ++ H H+ +G A AN  +++  G      +I 
Sbjct: 161 VCDTVGILTPLKAIDLIKTMKNTI-KIPVSIHCHNDFGMATANTLSAISAGADQCHVTIN 219

Query: 236 GLGGCPYAKGASGNVATEDVVYLLNGL-GIETGIDLEALIGAGQQISSVLGRPTGSRVA 293
           G+G        +GN + E+VV  L  L  IETGID E L    + +S  +  P  +  A
Sbjct: 220 GIG------ERAGNASLEEVVMSLKSLYDIETGIDTEKLHKISRIVSKYMKIPVPANKA 272