Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (357), Expect = 1e-38
 Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 22/314 (7%)

Query: 3   LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62
           L+++DLNL +    +  E ++TRA   + ++Q AVS +LA+LRE F+DPLFVRT+ G+  
Sbjct: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79

Query: 63  TPMAQNIIGPVRNALSLLRVSVQESRIFNPQQAAKTYRISMTDLTEAVILPLLFQRLRRL 122
           TP A  +   +   ++ L +  Q +  F+PQ +   ++I+  +    +I+P     + R 
Sbjct: 80  TPKALFLKPKLDVLVNQLELLTQPAH-FSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRH 138

Query: 123 APTVVIESFLSKRRETTKELAAGRLDFAV--------DAPLNTDP--QVRHVKLMEDRYV 172
            P + I +  +   +T ++L  G LDF +        DA L   P   +   ++  D   
Sbjct: 139 GPHLSISTH-AWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQR 197

Query: 173 CAMRKGHPLAGKDKLTLDDYLGLTHIHISSRRNGLGHVDLALGKMGLQRKIALRSQHYLM 232
           C +R+GHP+   D   L  YL L H+ +    N    +D  L  +G +R IA+    +  
Sbjct: 198 CVVRRGHPVLQYD-WNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNS 256

Query: 233 ASQVLQQTDMVMTVPERF----ARRHELHWFNLPVNDVPPVETHLYWHESTDQDPANRWM 288
           A+ +   TD + T P  F    A++ +L    LP+ + PP+   L+WH   + DPA RW+
Sbjct: 257 AASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPM-EFPPMAYTLFWHRERENDPALRWL 315

Query: 289 REQMIELCQQVTAH 302
           R    EL Q  T H
Sbjct: 316 R----ELIQTNTLH 325