Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas simiae WCS417

Subject, 270 a.a., exodeoxyribonuclease III (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  396 bits (1017), Expect = e-115
 Identities = 183/266 (68%), Positives = 224/266 (84%), Gaps = 2/266 (0%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60
           MKIVSFNINGLR+R HQL ALI+ HQPD+IGLQETKVHD+ FPLAEV+A+GYHV+YHG K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60

Query: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADENGHPVTIMNGYFPQGESRDHP 120
            HYGVA+LS+   L + KGFA+DEEDAQRR I GTFA  NG P+T++NGYFPQGES DHP
Sbjct: 61  AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120

Query: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDINISPEDIDIGIGADNAKRWLKTGKCSF 180
           TK+PAK++FY+DL   L +  SND+ + ++GDINISP D+DIGIG  N KRWLKTGKCSF
Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180

Query: 181 LPEEREWMARLKNWGLVDSFRHLNPDVADRFSWFDYRSRGFEDEPKRGLRIDVILASNGL 240
            PEEREW+  L++WGLVD+FR L+PD ++R+SWFDYRS+GF+D   RGLRIDVILA+  L
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDD--NRGLRIDVILATPSL 238

Query: 241 LSRVKDAGVDYELRGLEKPSDHAPIW 266
            +R+ ++ VDYELRG++KPSDHAPIW
Sbjct: 239 AARLVESDVDYELRGIDKPSDHAPIW 264