Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 604 a.a., Outer membrane protein from Pseudomonas stutzeri RCH2

 Score =  808 bits (2086), Expect = 0.0
 Identities = 383/565 (67%), Positives = 463/565 (81%), Gaps = 4/565 (0%)

Query: 11  LILLFTSCGALAQSELDVRVKPSNDALKANIEGYIGGVGDRDEEALLRFSRGAEEQARKA 70
           L+L   S GA   +ELDVR++P + AL+ NIE YIG +GDRD   LLR+SR A+ QA KA
Sbjct: 44  LMLSGISAGA---AELDVRIEPQSRALRENIENYIGDLGDRDANELLRYSRVAQRQAEKA 100

Query: 71  AQALGFYQPRIESDVKGGNNPRLILTIDPGEPVHLRNVTIRVDGPAADLKAFRVPVSNDL 130
            QALG+Y+ RI +DV+ G+ P L+L +  GEPV LRN+T+R+DGPAA+   FRV     L
Sbjct: 101 LQALGYYRSRIRTDVREGDEPTLVLRVQTGEPVRLRNITVRLDGPAAEFSGFRV-AQRTL 159

Query: 131 KSGAVLNHGHYEDAKRLIQNQASRYGFFSGRFTRQKLAVDPQAGVADIELIYDSGPRYTL 190
           + G VLNHG YED K+   NQASRYG+F GRFTRQ+LAVDP+   AD+EL++DSGPRY L
Sbjct: 160 RQGDVLNHGRYEDVKQQFLNQASRYGYFDGRFTRQRLAVDPRENTADVELVFDSGPRYRL 219

Query: 191 GKVSFAGDTPFDEELLHRMVPFKSGTPYDSELIAELNQNLQASGFFEGVRVDAAPAASTN 250
           G V F GD PFD++LL RMVPF + TPYDSELIAEL+Q LQ+SG+FEGVRVDA P +++ 
Sbjct: 220 GDVRFEGDAPFDDDLLRRMVPFDADTPYDSELIAELSQALQSSGYFEGVRVDANPTSASE 279

Query: 251 DIIPVAVRLETRKPRTMGLGLGFSTDVGPRGKANWTRHWVNPQGHSYGWEAELSAPRQNV 310
             IPVAV L TRKPRT GLGLG+STDVGPR + NWTRHWVNPQGHSYG E ELSAPRQNV
Sbjct: 280 QRIPVAVALTTRKPRTFGLGLGYSTDVGPRVRLNWTRHWVNPQGHSYGAETELSAPRQNV 339

Query: 311 GLWYDIPLDPPLTDKLRFAGGYQNEEIANTDTVSKLLTLGPEWHSKLPSGWTRVISLKYQ 370
           GLWYDIPLDPPLTDKLRF GGYQ EEIA TDT+S+LL +GPEWHS+LPSGW RV+SLK+Q
Sbjct: 340 GLWYDIPLDPPLTDKLRFVGGYQYEEIAGTDTLSRLLKVGPEWHSRLPSGWLRVVSLKWQ 399

Query: 371 REEYRLGNDSGLSNLVMPGVSYSYLRSDNRIDPHNGYRLQFDTKVAKEGLGSDTNLLYGT 430
            EEY+LG+DSG+S L+MPG++YSYLRSDNRIDP NGYRLQF+   AK G+ SD +L++  
Sbjct: 400 HEEYKLGDDSGISTLLMPGIAYSYLRSDNRIDPSNGYRLQFEVAAAKSGVLSDADLVHAN 459

Query: 431 ALVKGLTTLWDNHRFLARAQVGGSATNGYKSVPPSLRFFAGGDQSVRGYEYQTLSPENDR 490
            L++GLTTL   HRFL R Q+GG+ T+ Y +VPPSLR+FAGGDQSVRGY+YQ+LSP N  
Sbjct: 460 VLLRGLTTLGQRHRFLGRVQLGGNWTDEYVNVPPSLRYFAGGDQSVRGYDYQSLSPTNSD 519

Query: 491 GDRVGGRYMVALSAEYQYSIAEKWRIATFIDQGNSFNNLDLPSLKTGVGVGIRWVSPVGP 550
           GD++GGRY  A+SAEYQYSIAEKWR+ATF+DQGN+FN+L++P+LK+ VGVG+RWVSPVGP
Sbjct: 520 GDKIGGRYQFAVSAEYQYSIAEKWRVATFVDQGNAFNSLEIPTLKSAVGVGVRWVSPVGP 579

Query: 551 IRLDLAHALEDPGGIRLHFSMGPEL 575
           IR+DLAH L+  GG+RLHFSMGPEL
Sbjct: 580 IRVDLAHPLDSEGGVRLHFSMGPEL 604