Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 632 a.a., surface antigen (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (314), Expect = 5e-33
 Identities = 124/528 (23%), Positives = 219/528 (41%), Gaps = 28/528 (5%)

Query: 65  EQARKAAQALGFYQPRIESDVK-GGNNPRLI-LTIDPGEPVHLRNVTIRVDGPAADLKAF 122
           ++  KA ++ G+Y   + +DV+     P ++ +  DPG    +  V +   G A+D+   
Sbjct: 110 DRFHKALRSRGYYDADLSADVRDSAPGPAMVEVRADPGPVYQVAKVAMDYRG-ASDVDG- 167

Query: 123 RVPVSND---LKSGAVLNHGHYEDAKRLIQNQASRYGFFSGRFTRQKLAVDPQAGVADIE 179
            +P   D   LK G           ++ +     +      +   + + VD      ++ 
Sbjct: 168 -LPQGADAVGLKLGQTARADDVLAGEKRLSEDLRKSARPLAKVVDKVVVVDHAGRTMEVT 226

Query: 180 LIYDSGPRYTLGKVSFAGDTPFDEELLHRMVPFKSGTPYDSELIAELNQNLQASGFFEGV 239
            + + GP    G +  +G     E  + +MVP++ G  YD + +  L + L  S  F  V
Sbjct: 227 YVVEPGPVADFGALRVSGLDRVKESFVRKMVPWREGEAYDEDQLRALRKRLSDSRLFATV 286

Query: 240 RVDAAPAASTNDIIPVAVRLETRKPRTMGLGLGFSTDVGPRGKANWTRHWVNPQGHSYGW 299
            +  A     +  IP+ + +     RT+  G+ ++TD G      W    +   G  +  
Sbjct: 287 HLTPAAEVGADGRIPIDLTVSEGAHRTISAGVSYATDTGAGATLRWEHRNLLGAGEKFRA 346

Query: 300 EAELSAPRQNVGLWYDIP--LDPPLTDKLRFAGGYQNEEIANTDTVSKLLTLGPE-W-HS 355
           +   +   Q++ L +  P  LDP  T  +  +   ++ E  + +     + L  E W H 
Sbjct: 347 DVVAAQKEQSLDLTFRKPYFLDPRQTLTMNASVSREDGEAYSGEVGELGMGLEREVWEHW 406

Query: 356 KLPSGWTRVISLKYQREEYRLGNDSGLSNLVMPGVSYSYLR--SDNRIDPHNGYRLQF-D 412
           +L  G    ++ +Y +  +           ++ GV  S +R  +D+ +DP  G RL    
Sbjct: 407 RLSGG----LAFEYGQLVWEADPSDARRRHMLAGVPLSAIRDGTDDLLDPTTGTRLALAA 462

Query: 413 TKVAKEGLGSDTNLLYGTALVKGLTTLWDNHRFLA-RAQVGGSATNGYKSVPPSLRFFAG 471
           T  A +  G+ T  L             +N   LA RA++         +VPP+ R FAG
Sbjct: 463 TPFAGQVDGAGTTFLVLETTGSAYYPAIENRLVLAGRARLASLTGADLTNVPPNHRLFAG 522

Query: 472 GDQSVRGYEYQTLSPENDRGDRVGGRYMVALSAEYQYSIAEKWRIATFIDQGNSFNNLDL 531
           G  SVRGY +  + P N   D  GGR    +  E +  I E   I  F+D G        
Sbjct: 523 GGGSVRGYGHNLIGPLNGDDDPTGGRSAAEIGVEARIKITETIGIVPFLD-GGLVTTESW 581

Query: 532 PS----LKTGVGVGIRWVSPVGPIRLDLAHALEDPG---GIRLHFSMG 572
           PS    ++ G G+G+R+ +  GP+R D+A  L   G     +++ S+G
Sbjct: 582 PSFSEDIRWGAGLGVRYHTSFGPLRADVAMPLNPRGSDDSFQVYISLG 629