Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 594 a.a., surface antigen (D15) (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 95.5 bits (236), Expect = 5e-24
 Identities = 131/553 (23%), Positives = 225/553 (40%), Gaps = 86/553 (15%)

Query: 70  AAQALGFYQPRIESDVKGGNNPRLILTIDPGE-PVHLRNVTIRVD-GPAADL-KAFRVPV 126
           A  A G+Y   +  ++ G    R + ++ P E P  +  +++ VD GP     +A   P+
Sbjct: 75  ALYAKGYYSATVSIEIDG----REVSSLSPFETPAQVATISVAVDPGPLFRFGRAEVTPL 130

Query: 127 SNDLKSGAVLNHGHYEDAKRLIQNQASRYGFFSGRFT-RQKLAVDPQAGVA-------DI 178
           + D +       G  E A   + +QA+R      R     K+AV  Q+  A       D+
Sbjct: 131 APDTELPDEFQTG--EPALSGLISQAARAAVQGWRDQGHAKVAVAGQSVTANHADAELDV 188

Query: 179 ELIYDSGPRYTLGKVSFAGDTPFDEELLHRMVPFKSGTPYDSELIAELNQNLQASGFFEG 238
            +  D+GPR T G +   G+     E +  M+ F+ G  +  + +  + + +Q +G F  
Sbjct: 189 TVTLDTGPRLTFGNLEITGNEDVRTERVEAMIGFEPGMQFSDDNLDTIQRRVQRTGAFRF 248

Query: 239 VRVDAAPAASTNDIIPVAVRLETRKPRTMGLGLGFSTDVGPRGKANWTRHWVNPQGHSYG 298
             V  A  A+ +D I + V ++  + R     LGF  ++G     + T  W +       
Sbjct: 249 ALVKEAEVANPDDTIDILVEVQEEQKRR----LGFGGEIGSSDGVSLTAFWFH------- 297

Query: 299 WEAELSAPRQNVG----LWYDIPLDPPLTDKLRFAGGYQNEEIANTDTVSKLLTLGPEWH 354
                   R  +G    L +D+ L   + D          E +  T  V K     PE  
Sbjct: 298 --------RNLLGGAERLRFDVALSREIEDNAEL------EYLVGTSFV-KPSVFAPEGD 342

Query: 355 SKLPSGWTRVISLKYQRE--EYRLGNDSGLSN--LVMPGVSYSYLRSDNRIDPHN----- 405
            +     +R  S  ++ +  E+ +G D  L+       G+  +  R+D R +  +     
Sbjct: 343 FRTSISISREASESFREDIFEFNIGFDYRLTEDLFTYGGLRLTTTRTDLRPEKRDFLIVG 402

Query: 406 -GYRLQFD----TKVAKEGLGSDTNLL--YGTALVKGLTTLWDNHRFL-----------A 447
             + L +D    T  A+EG+ +   L    G         L  + R+            A
Sbjct: 403 APFGLVYDNREITTDAREGIYAKAELFPFLGQRDADDGARLTVDARYYRSFAEESLTLAA 462

Query: 448 RAQVGGSATNGYKSVPPSLRFFAGGDQSVRGYEYQTLSPENDRGDRVG-GRYMVALSAEY 506
           R Q+G        +VP S  F +GG  +VRG  +++L    DR   VG G     LS E 
Sbjct: 463 RGQLGSVFNARSGAVPESFLFLSGGGGTVRGQPFESLGV--DRNGTVGSGEGFAGLSLEA 520

Query: 507 QYSIAEKWRIATFID-----QGNSFNNLDLPSLKTGVGVGIRWVSPVGPIRLDLAHAL-- 559
           +Y + +      F D     +G+ F         +G G+G+R+ +PVGPIRLD+A  +  
Sbjct: 521 RYRLTDTIGAVGFFDYGFITEGDVFTGSG--KSHSGAGLGLRYDTPVGPIRLDIAAPVGG 578

Query: 560 EDPGGIRLHFSMG 572
           +   G++ +F +G
Sbjct: 579 DTDDGVQFYFGLG 591