Pairwise Alignments

Query, 575 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 591 a.a., surface antigen (D15) (RefSeq) from Shewanella sp. ANA-3

 Score =  302 bits (773), Expect = 3e-86
 Identities = 198/594 (33%), Positives = 299/594 (50%), Gaps = 45/594 (7%)

Query: 22  AQSELDVRVKPSNDALKANIEGYIGGVGDRDEEALLRFSRGAEEQARKAAQALGFYQPRI 81
           A + L + V   ++ALK NI  ++G + D + +    F    E+    A +++G+Y   +
Sbjct: 3   ADNLLTLSVNGVDEALKRNILAHLGAMPDSEVQRRA-FLFNVEDNVSTALESMGYYHGEV 61

Query: 82  ESD-VKGGNNP-RLILTIDPGEPVHLRNVTIRVDGPAADLKAFRVPVSN-DLKSGAVLNH 138
           E   V+    P  L LT+  GEPV ++ V I   G   D +AF   ++  ++K G  LNH
Sbjct: 62  EEQLVEKEKGPWELKLTVKAGEPVKIQWVDINFSGEMLDDRAFDKWLAEVNIKPGDTLNH 121

Query: 139 GHYEDAKRLIQNQASRYGFFSGRFTRQKLAVDPQAGVADIELIYDSGPRYTLGKVSFAGD 198
           G Y D K  +   A   G+F G FT  ++ ++     A I L ++SG RY  G+VSF G 
Sbjct: 122 GVYADVKSQLVTLALARGYFDGEFTESQIKINRDLNTAQISLHFNSGARYRFGQVSFEGH 181

Query: 199 TPFDEELLHRMVPFKSGTPYDSELIAELNQNLQASGFFEGVRVDAAPAASTNDIIPVAVR 258
           T  + ++L +++PFK    Y +  ++ LN+ L  +G+F  ++V      + ++ +PV V 
Sbjct: 182 T-LEPDILTKLIPFKEDAAYSTRRVSSLNRQLLDTGYFANIKVIPQIDQAKDNQLPVKVE 240

Query: 259 LETRKPRTMGLGLGFSTDVG--------PRGKANWTRHWVNPQGHSYGWEAELSAPRQNV 310
           L  +   ++ LGLG   D+G        PR +  W    +N  GHS     E S  R   
Sbjct: 241 LTNKASHSIELGLG--GDIGQSADKTFDPRVRVTWRTPQINKYGHSQETSLEWSPDRPKF 298

Query: 311 GLWYDIPLDPPLTDKLRFAGGY-------------QNEEIANTDTV-SKLLTLGPEWHSK 356
              Y IPL  PL D+L+   G              +N +  NT  + S    LG     +
Sbjct: 299 LTTYTIPLTHPLDDQLKIRLGLLRDKYGVTQIYEPENRDFRNTGQLESTKYLLGLLRQQR 358

Query: 357 LPSGWTRVISLKYQREEYRLGNDSGLSNLVMPGVSYS-YLRSDNRIDPHNGYRLQFDTKV 415
           L + W    SL   REEY   +     +  + G+++S   R DN +DP +G+R  +    
Sbjct: 359 LDNQWLMTYSLDAIREEYTQSDTDYSPSFYLAGINFSKTTRGDNSLDPKSGFRQMYSLDY 418

Query: 416 AKEGLGSDTNLLYGTALVKGLTTLWDNHRFLARAQVGGSATNGYK--SVPPSLRFFAGGD 473
           A   LGS+T L    A  K + T +DNHR +AR  +  +  N  +   +PPSLR+FAGGD
Sbjct: 419 ADPYLGSETRLARLQAKFKWIDTFFDNHRIVARMDLAANLANENELAFIPPSLRYFAGGD 478

Query: 474 QSVRGYEYQTLSPENDRGDR--------VGGRYMVALSAEYQYSIAEKWRIATFIDQGNS 525
           Q++RGY YQ L P  D  D         +GGRY++  S EYQY +   WR+ATF+D GN+
Sbjct: 479 QTIRGYGYQELGPYLDYIDADGKVNREVIGGRYLMVGSLEYQYYVTPTWRVATFVDAGNA 538

Query: 526 FNNLDLPSLKTGVGVGIRWVSPVGPIRLDLAHALEDPGGI----RLHFSMGPEL 575
           F+N     +   VG GI W+SP+GPI+LDL   L++   I    R+H +MG EL
Sbjct: 539 FDNNQFEPV-VSVGGGIHWISPIGPIKLDLGVGLKETDTIDRSWRIHLTMGTEL 591