Pairwise Alignments

Query, 214 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 212 a.a., capsular synthesis regulator component B, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 2e-34
 Identities = 78/211 (36%), Positives = 122/211 (57%), Gaps = 6/211 (2%)

Query: 6   VVIADDHPIVLVGVRELV-ERDKRFRVVGEAVCSNELVTLLENTAVDLVITDFNMPADSP 64
           +++ADDHPI+L GVR L+ E      +V EA   +EL   LE    DL+ITDF+MP D  
Sbjct: 5   IILADDHPIILTGVRSLMAEMQPSCDIVAEANNVSELWRTLEQHECDLLITDFSMPNDDN 64

Query: 65  YGDGLKLVEYLVRHFPKVRVLVLTMISNPLILTRLQEVGVLAVIQKNQLHNEIQAVLKAI 124
             DG+ +++ L R +P + ++VLT + N  +L  L ++G+  ++ K  +  E++  +K +
Sbjct: 65  V-DGMAMIKQLRRKYPNLPIIVLTQVHNLGVLQALLQIGIQGLLLKKSVIAELEKTVKKV 123

Query: 125 ARGIPVRSKGPQPTSVLESSDLDERF--TRLSPKEHEILRLFISGQSVNEIARGLNRSAK 182
             G      G     +L    +++      LS KE E++RL  +G SV ++A  LNRS K
Sbjct: 124 LLGSVYI--GETVHELLNEQGINQYAIPVELSLKEIEVVRLLANGMSVTQVASYLNRSVK 181

Query: 183 TISTQKVSAMRKLEVGSDQDLLAYCIERNLF 213
           TISTQK +AM+KL + SD +L  Y  ++ LF
Sbjct: 182 TISTQKTNAMQKLGLKSDSELFHYAQQQGLF 212