Pairwise Alignments

Query, 1052 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

 Score =  191 bits (485), Expect = 2e-52
 Identities = 116/271 (42%), Positives = 157/271 (57%), Gaps = 5/271 (1%)

Query: 474 EARQAADSASQAKSRFLATMSHEIRTPLYGVLGTLELLGLTSLAPRQQDYLQTIQRSSTT 533
           +ARQ A+ AS+AKS FLATMSHEIRTP+ GVLGT  LL  T+L   QQ Y+Q I RS  +
Sbjct: 458 KARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRS 517

Query: 534 LFQLISDVLDVSKIEAGQMTLELQDFCPLELTEDCVRTYGAFARSKGLQLYACIDANLPD 593
           L  +++DVLD SKIEAG + +    F    L  +      + AR KG+ L   ID ++  
Sbjct: 518 LLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDEDVTQ 577

Query: 594 RLRGDPLRIRQILNNLLSNAIKFTDNGRVVLRLRGLETSDGRVELQWQVSDSGVGIAQAQ 653
             +GD +RI Q+LNNL+ N IKFTD G V +R+R      G   +++ V DSG+GIA+ +
Sbjct: 578 YWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLAPDGQG---IRFAVEDSGIGIAEEE 634

Query: 654 QHQLFDPFYQAEDATRQ-AGAGLGLAICKWLCELMHGQLNVVSEPGLGSSFTLQVALEPV 712
           Q  LFD F QA+   R+  G GLGLAI + L + M G+L + S+ G GS F   + L PV
Sbjct: 635 QATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPL-PV 693

Query: 713 PGTLADCPVFSPDTPAVYVRAPEAERTQCMI 743
              +    +   D P   V   E     C++
Sbjct: 694 GEPVETPALAVDDVPVANVLLVEDNEVNCLV 724



 Score = 65.5 bits (158), Expect = 2e-14
 Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 5/117 (4%)

Query: 837 VLVAEDNVINAAIIQEQLEALGCSVVLTSDGEQALTQWLPGRFDLVLTDVNMPVMNGYQL 896
           VL+ EDN +N  + Q  L +LG  V L    ++A   +   RFD+ L D+++P  NG  L
Sbjct: 712 VLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDL 771

Query: 897 AEALRRQD-----ATLPIIGITANAMREEGEHCTAVGMNGWMVKPLNLATLRAQLEK 948
              LR+ +     A +P I ++A+   EE     A G +G++ KPL    L A L +
Sbjct: 772 LRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQ 828