Pairwise Alignments

Query, 1052 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (598), Expect = 2e-65
 Identities = 193/647 (29%), Positives = 305/647 (47%), Gaps = 85/647 (13%)

Query: 458  VVHDVTRHIEDAAALEEARQAADSASQAKSRFLATMSHEIRTPLYGVLGTLELLGLTSLA 517
            ++ D+T   E    L +A++AAD+ SQAK  FLA MSHEIRTP+  +LG   L   T L 
Sbjct: 579  ILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLD 638

Query: 518  PRQQDYLQTIQRSSTTLFQLISDVLDVSKIEAGQMTLELQDFCPLELTEDCVRTYGAFAR 577
              Q+ Y+  I  S+  L  +I+D+LD SK+EAG++ +E  DF   ++ ++        A+
Sbjct: 639  TTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQ 698

Query: 578  SKGLQLYACIDANLPDRLRGDPLRIRQILNNLLSNAIKFTDNGRVVLRLRGLETSDGRVE 637
             KG++    ID ++P  L GDPLR+ Q++ NL  NA+KFT  G +VL  R  + ++ +V 
Sbjct: 699  EKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVT 758

Query: 638  LQWQVSDSGVGIAQAQQHQLFDPFYQAEDA-TRQ-AGAGLGLAICKWLCELMHGQLNVVS 695
            L++ V D+G+GIAQ +   LFD F QA+++ TRQ  G GLGL+I K L ELM GQ+ V S
Sbjct: 759  LRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHS 818

Query: 696  EPGLGSSFTLQVAL-----------EPVPGTLADCPVFSPDTPAVYVRAPEAERTQCMID 744
            E G GS+F   V             +PV G LAD  V   D         ++  T    +
Sbjct: 819  EEGKGSTFEFSVVCGLQDAKMRDISQPVHG-LADKRVLVVDDNDSARHILDSLLTAMRFN 877

Query: 745  WLK-RLGLDSRVFAADTPAAALLVDFTHDPAWPG----TRI------------IASAGGP 787
             +    G ++       P   L VD+ + P   G    TR+            + +A G 
Sbjct: 878  VVTVSNGFEALSEIQQKPFDMLFVDW-NMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGR 936

Query: 788  SPAQPYGSDWAVDANDVRAI-----------AWAVYLAQHGAEADHRPAPPTQARPLNLQ 836
                   +   VDA  V+ +           ++ +   +H     H  + P  A      
Sbjct: 937  EINLDGENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFA---GQS 993

Query: 837  VLVAEDNVINAAIIQEQLEALGCSVVLTSDGEQALTQWLPGRFDLVLTDVNMPVMNGYQL 896
            +L+ EDN +N  +    L+  G +VV+ + G++AL +     FDLVL D+ MPVM+G   
Sbjct: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITA 1053

Query: 897  AEALRRQDA--TLPIIGITANAMREEGEHCTAVGMNGWMVKPLNLATLRAQLEKHCKIE- 953
             E +R      +LPI+ +TANAM  + E C   GMN  + KP+ +      L    ++  
Sbjct: 1054 TEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSD 1113

Query: 954  ------------------VPAVVDMPPLSP------------------KMRELFVTTLRQ 977
                              + A++D+P L+                   ++   F+ +   
Sbjct: 1114 EQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVD 1173

Query: 978  DVHTTLAALDNQDASGTAQQLHSMAGALGAVQLVDLANAFVELELRL 1024
            ++++    ++ QD S   +  H++ G+   + L  LA    E+E  L
Sbjct: 1174 ELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSL 1220