Pairwise Alignments

Query, 1052 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  250 bits (639), Expect = 6e-70
 Identities = 175/513 (34%), Positives = 263/513 (51%), Gaps = 47/513 (9%)

Query: 472  LEEARQAADSASQAKSRFLATMSHEIRTPLYGVLGTLELLGLTSLAPRQQDYLQTIQRSS 531
            L +A+  AD+AS+AKS FLA MSHEIRTP+  ++G  +L   TSL  +QQ+Y++ I R+S
Sbjct: 1026 LTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDKKQQNYVEKIDRAS 1085

Query: 532  TTLFQLISDVLDVSKIEAGQMTLELQDFCPLELTEDCVRTYGAFARSKGLQLYACIDANL 591
             +L  +I+D+LD SKIEAG++ +E   F    + ED    +   A  K L+L   +  N+
Sbjct: 1086 KSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLELLFAVAPNI 1145

Query: 592  PDRLRGDPLRIRQILNNLLSNAIKFTDNGRVVLRLRGLETSDGRVELQWQVSDSGVGIAQ 651
            P  L GDPLR+ Q+L NL++NAIKFT+ G V+L +  L   D  + L++ V D+G+G+ +
Sbjct: 1146 PRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVRDNGIGLTE 1205

Query: 652  AQQHQLFDPFYQAEDAT--RQAGAGLGLAICKWLCELMHGQLNVVSEPGLGSSFTLQVAL 709
             Q+ +LF  F QA+ +T  +  G GLGLAICK L ELM G++ V S+ G GS+F   V  
Sbjct: 1206 EQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFFFSVRF 1265

Query: 710  EPVPGTL----------------------------ADCPVFSPDT----PAVYVRAPEAE 737
            +     L                             +   F+ DT         R  E +
Sbjct: 1266 KVADNQLIKVAQELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSRCQETD 1325

Query: 738  RTQCMIDW----LKRLGLDSRVFAADT-PAAALLVDFTHDPAWPGTRIIASAGGPSPAQP 792
                +IDW    +  L    R+ +  T P   L+V    D  +      A   G    +P
Sbjct: 1326 YGVALIDWRMPEMDGLETARRLLSERTNPPKTLIVSAHADGDFIDKAEQAEISG-YITKP 1384

Query: 793  YGSDWAVDA-NDVRAIAWAVYLAQHGAEADHRPAPPTQARPLNLQVLVAEDNVINAAIIQ 851
              +   +D          A+ + + G+E     +P   A+    ++L+ EDN +N  +  
Sbjct: 1385 ISASRLLDGIMSALGKQGAMPVRRKGSEV----SPALLAQLKGKRILLVEDNEMNQEVAS 1440

Query: 852  EQLEALGCSVVLTSDGEQALTQWLPGRFDLVLTDVNMPVMNGYQLAEALRRQD--ATLPI 909
            E LE +G  + +  +G+ AL +     FDLVL D  MPVM+GYQ    LR++   A LP+
Sbjct: 1441 EFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELRKRPELADLPV 1500

Query: 910  IGITANAMREEGEHCTAVGMNGWMVKPLNLATL 942
            I +TANAM  + E C   GMN  + KP+ ++ L
Sbjct: 1501 IAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLL 1533