Pairwise Alignments

Query, 395 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

Subject, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (363), Expect = 8e-39
 Identities = 90/231 (38%), Positives = 121/231 (52%), Gaps = 5/231 (2%)

Query: 144 LMNALVNGDLQAWFQPKKALSNGRIVAAEALVRWAHPEHGLLLPGVFLPALIACNLEERL 203
           L  AL    L+ W+QPK    +  I  AEALVRW HP  G + PG F+P      L E L
Sbjct: 431 LQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHL 490

Query: 204 LWCVLKQAMAAQATWRQQGYDIP--VSINLPTHLLNSHDLPDRIQAFVLEHQGL-PARIC 260
              V+++  A    W+ QG  +P  V+IN+      +  L D ++  +L   GL P  I 
Sbjct: 491 GRVVMREVFATVKRWKLQGI-LPGRVAINISPEQFGNPQLIDYLEK-LLRTTGLDPNNIT 548

Query: 261 FELMECSVPDDISNFYAGACRLRIKGFGLSQDDFGKGYSSYMNLVSAPFTELKIDRALVQ 320
           FEL E +V  D  +       ++  GF LS DDFG GYSS   L   P  ELKIDRA + 
Sbjct: 549 FELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFIS 608

Query: 321 GCNANEELAQALTSIVSLGRQLGLIVVAEGVETAQELALLRKIDCTQVQGF 371
             +   +    + +I++LGR L L VVAEGVET Q+  LL  ++C  +QGF
Sbjct: 609 NIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGF 659