Pairwise Alignments

Query, 928 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 984 a.a., TMAO reductase system sensor histidine kinase/response regulator TorS from Vibrio cholerae E7946 ATCC 55056

 Score =  181 bits (459), Expect = 2e-49
 Identities = 112/276 (40%), Positives = 162/276 (58%), Gaps = 7/276 (2%)

Query: 421 CAFSDISARTQIEAALE-QARQSADAANEAKTLFLATMSHEIRTPLYGVLGTLELLARTR 479
           C  S+++ +   E     +ARQ A+ A+ AK+ FLATMSHEIRTP+ GVLGT  LL  T 
Sbjct: 440 CQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTT 499

Query: 480 LDAQQKSYLHAIEGSSATLLQLICDVLDVSKIEAGQLALELSEFCVPTLVQEVVQGYAAA 539
           L + Q+ Y+  I  S  +LL ++ DVLD SKIEAG L +  + F +  LV E  +   + 
Sbjct: 500 LTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSR 559

Query: 540 AHSKGLQLYACLDPQLPRRLIGDASRVRQILNNLLSNAVKFTDSGRVVLRVKKLGREGER 599
           A  KG+ L   +D  + +   GD  R+ Q+LNNL+ N +KFTD G V +R+ +L  +G+ 
Sbjct: 560 AREKGITLTYHIDEDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRI-RLAPDGQG 618

Query: 600 VCLQWQISDTGKGIAPADQAFIFEPFYQSEGNSHVIAGTGLGLPICLRLTHLMNGTLRMV 659
           +  ++ + D+G GIA  +QA +F+ F Q++     + GTGLGL I  +L   M G L++ 
Sbjct: 619 I--RFAVEDSGIGIAEEEQATLFDAFTQADAGRRKLGGTGLGLAISRKLVQAMGGELQLA 676

Query: 660 SEPGLGSSFSLTVPLEQPSGNAPQSLQALAPEIVYV 695
           S+ G GS F  T+PL  P G  P    ALA + V V
Sbjct: 677 SQLGQGSCFWFTLPL--PVGE-PVETPALAVDDVPV 709



 Score = 60.5 bits (145), Expect = 5e-13
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 6/132 (4%)

Query: 791 PPQTRCEARDLRPLHLHILVAEDNVINQLILRDQLEELGCSVELAGDGEDALARWHEGTF 850
           P +T   A D  P+  ++L+ EDN +N L+ +  L  LG  V LA   ++A   + +  F
Sbjct: 696 PVETPALAVDDVPV-ANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRF 754

Query: 851 DVVLTDVNMPRLNGYELAEALRRL-----GCTTPIIGATANALRGEEALCLAAGMNHCLV 905
           D+ L D+++P  NG +L   LR++         P I  +A+    E A  LAAG +  L 
Sbjct: 755 DIALLDIHLPDGNGVDLLRDLRQMEDSIHNAVIPFIAVSAHVFNEEVAGYLAAGFDGYLP 814

Query: 906 KPFTLRALSTVL 917
           KP     L+ +L
Sbjct: 815 KPLVKEQLAAML 826