Pairwise Alignments

Query, 928 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  207 bits (527), Expect = 2e-57
 Identities = 161/520 (30%), Positives = 259/520 (49%), Gaps = 33/520 (6%)

Query: 436 LEQARQSADAANEAKTLFLATMSHEIRTPLYGVLGTLELLARTRLDAQQKSYLHAIEGSS 495
           L+ A++ A  A   K+ FLA MSHE+RTPL GV+G    + +T+L   Q  YL  IE S+
Sbjct: 277 LDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSA 336

Query: 496 ATLLQLICDVLDVSKIEAGQLALELSEFCVPTLVQEVVQGYAAAAHSKGLQLYACLDPQL 555
             LL +I D+LD SK+EAG+LALE   F    +++EVV   A +AH KGL++   +DP++
Sbjct: 337 NNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKI 396

Query: 556 PRRLIGDASRVRQILNNLLSNAVKFTDSGRVVLRVKKLGREGERVCLQWQISDTGKGIAP 615
           PR ++GD  R++Q+L NL+ N++KFT+ G + + V+      + + LQ+ + DTG GI+ 
Sbjct: 397 PRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISE 456

Query: 616 ADQAFIFEPFYQSEGN-SHVIAGTGLGLPICLRLTHLMNGTLRMVSEPGLGSS--FSLTV 672
             QA +F+ F Q++ + S    GTGLGL I  +L   M G + + S    GS+  F+L +
Sbjct: 457 RQQAQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRL 516

Query: 673 PLEQPSGNAPQSLQALAPEIVYVLSPIRELADSLCGWLRRWGARA--QVGLPTSTQLAGH 730
              +   N   +  +L    + ++ P  + A  +   L + G     +  +P    +  +
Sbjct: 517 HTTELPLNDGYNADSLNHRHLLLIEPNMQAAAIVQQTLVQSGLEVTYRSAIPEEQHVYDY 576

Query: 731 CVLLELMERRLDLP-----WQGPRVLASNDGAHEPQFNGDGWQVNLND-------LDAIQ 778
            VLL L   +   P     W   R LA     H         ++ L D       +  I 
Sbjct: 577 -VLLNLAPSKETNPTLVELWV-QRALAMT---HNVIVGVPSTELALADQLMQRYPVKCIS 631

Query: 779 QAVRHAQNGQVVPPQTRCEARDLRP------LHLHILVAEDNVINQLILRDQLEELGCSV 832
           + +   +  Q +  Q    A    P      L L ++  +DN  N  ++   L+E    V
Sbjct: 632 KPLSRKKLLQTLAAQQPQLANTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYV 691

Query: 833 ELAGDGEDALARWHEGTFDVVLTDVNMPRLNGYELAEALRRLG--CTTPIIGATANALRG 890
                G++A+ +     FD++L D+ MP ++G    +A+++L     TP+I  TA+A+ G
Sbjct: 692 VSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLKGYRDTPVIAVTAHAMAG 751

Query: 891 EEALCLAAGMNHCLVKPFTLRALSTVL---APYERATHEA 927
           E    L AGM+  L KP     L  VL   +P+ R+   A
Sbjct: 752 ERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVA 791