Pairwise Alignments

Query, 928 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (567), Expect = 8e-62
 Identities = 179/582 (30%), Positives = 275/582 (47%), Gaps = 61/582 (10%)

Query: 391  SLTDYFEAADGRHLYLSCAPTRYKGEDVLLCAFSDISARTQIEAALEQARQSADAANEAK 450
            SL DY        +Y +    R    + ++    D++ R ++E  L +A+++ADA ++AK
Sbjct: 548  SLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMSQAK 607

Query: 451  TLFLATMSHEIRTPLYGVLGTLELLARTRLDAQQKSYLHAIEGSSATLLQLICDVLDVSK 510
              FLA MSHEIRTP+  +LG   L   T LD  Q+ Y+  I  S+  LL +I D+LD SK
Sbjct: 608  GDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSK 667

Query: 511  IEAGQLALELSEFCVPTLVQEVVQGYAAAAHSKGLQLYACLDPQLPRRLIGDASRVRQIL 570
            +EAG+L +E  +F +  ++  V    +  A  KG++    +DP +P  LIGD  R+ Q++
Sbjct: 668  MEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVM 727

Query: 571  NNLLSNAVKFTDSGRVVLRVKKLGREGERVCLQWQISDTGKGIAPADQAFIFEPFYQSEG 630
             NL  NAVKFT  G +VL  +      ++V L++ + DTG GIA      +F+ F Q++ 
Sbjct: 728  VNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADN 787

Query: 631  N-SHVIAGTGLGLPICLRLTHLMNGTLRMVSEPGLGSSFSLTVPL---EQPSGNAPQSLQ 686
            + +    GTGLGL I  +L  LM G + + SE G GS+F  +V     +    +  Q + 
Sbjct: 788  SITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVH 847

Query: 687  ALAPEIVYVL---SPIRELADSLCGWLRRWGARAQVGLPTSTQLAGHCVLLELMERRLDL 743
             LA + V V+      R + DSL   +R             T   G   L E+ ++  D+
Sbjct: 848  GLADKRVLVVDDNDSARHILDSLLTAMR---------FNVVTVSNGFEALSEIQQKPFDM 898

Query: 744  ---PWQGP---------RVLASNDGAHEPQF--NGDGWQVNL------------------ 771
                W  P         RV       H   F     G ++NL                  
Sbjct: 899  LFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNP 958

Query: 772  -NDLDAI--QQAVRHAQNGQVVPPQTRCEARDLRP--LHLHILVAEDNVINQLILRDQLE 826
             N LDAI     + H ++      +T     + RP      +L+ EDN +NQ +    L+
Sbjct: 959  SNLLDAIVTSYGIEHVRH------KTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQ 1012

Query: 827  ELGCSVELAGDGEDALARWHEGTFDVVLTDVNMPRLNGYELAEALRR--LGCTTPIIGAT 884
            + G +V +A  G++AL R     FD+VL D+ MP ++G    E +R      + PI+  T
Sbjct: 1013 DTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMT 1072

Query: 885  ANALRGEEALCLAAGMNHCLVKPFTLRALSTVLAPYERATHE 926
            ANA+  +   CL AGMN  L KP  +     VL  + + + E
Sbjct: 1073 ANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDE 1114