Pairwise Alignments

Query, 928 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 1171 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  197 bits (500), Expect = 4e-54
 Identities = 179/574 (31%), Positives = 265/574 (46%), Gaps = 75/574 (13%)

Query: 404  LYLSCAPTRYKGEDVLLCAF--SDISARTQ-------IEAALEQA----RQSADAANEAK 450
            LY+S +P   + +  L  A    D+S   Q       + A LE+      Q    A+  K
Sbjct: 452  LYVSVSPILGENKHALGVAIIIRDVSIEKQAAKKIQLVNAELEKKVAIRTQELQKASLVK 511

Query: 451  TLFLATMSHEIRTPLYGVLGTLELLARTRLDAQQKSYLHAIEGSSATLLQLICDVLDVSK 510
            + F++ +SHE+RTPL G++GTL L+ +  L  +Q  YL   E S  TL  LI DVLD+SK
Sbjct: 512  SSFISNISHEMRTPLNGIVGTLNLVRKDSLTERQARYLEMAEVSVNTLSALINDVLDLSK 571

Query: 511  IEAGQLALELSEFCVPTLVQEVVQGYAAAAHSKGLQLYACLDPQLPRRLIGDASRVRQIL 570
            IEAG+L L++S F    L++ V    A  A  KG++    +     + +  D  R+ QIL
Sbjct: 572  IEAGKLDLDMSSFNPLNLIESVCSSMAVKAQEKGIEFVIDVVDLRCQSVDSDPHRITQIL 631

Query: 571  NNLLSNAVKFTDSGRVVLRVKKLGREGERVCLQWQISDTGKGIAPADQAFIFEPFYQSEG 630
             NL++NA+KFTD G + +R     RE   +    ++SDTG GIA  +QA +F  F Q+  
Sbjct: 632  TNLINNAIKFTDHGYIKVRAHSRLRETGELEFICEVSDTGIGIAEENQAKLFTAFSQATS 691

Query: 631  N-SHVIAGTGLGLPICLRLTHLMNGTLRMVSEPGLGSSFSLTVPLEQPSGNAPQSLQALA 689
            + +    GTGLGL IC  L+ L+NG +   S  G GS F  T+ L Q       + +AL 
Sbjct: 692  SIAAQYGGTGLGLSICKELSELLNGKMSFESHKGQGSCFIFTMVLHQGEFKL-MAPEALL 750

Query: 690  PEIVYVLSPIRELADSLC--GWLRRWGARAQVGLPTSTQL---------AGHCVLLE--- 735
             E+   +  + E A   C    + R G +   G P    L           H +++E   
Sbjct: 751  HEMTCSVLLVNE-AQQACVEAAIARLGGKLLPGSPIRDWLNQDAPVPDVLPHVLIVEQRH 809

Query: 736  LMERRLDLPW--------QGPRVLASNDGAHEPQFNGDGWQVNLN-DLDAIQQAVRHAQ- 785
             +   LD  W        + PRVLA        Q + DG +   N +L+ +   +  ++ 
Sbjct: 810  SLLTDLDSLWPTLTATHKRLPRVLAF-------QKSADGNKALRNIELEYLNNPLLFSEF 862

Query: 786  ----------------NGQVVPPQTRCEARDLRPLHLHILVAEDNVINQLILRDQLEELG 829
                            + QV P  +  EA  ++     +LV +DN IN  +    L EL 
Sbjct: 863  MQKFGAPKASSGVENVHPQVTPIISEEEAHRIK--GARVLVVDDNEINIEVALGILSELP 920

Query: 830  CSVELAGDGEDALARWHEGTFD-----VVLTDVNMPRLNGYELAEALR-----RLGCTTP 879
                 A +G++AL +  E   +      +L D  MP LNGY+   A+R          TP
Sbjct: 921  LEFVRAINGQEALTKLRECEQEGLGVHCILMDCQMPILNGYDCTRAIRAGEAGEAFVDTP 980

Query: 880  IIGATANALRGEEALCLAAGMNHCLVKPFTLRAL 913
            II  TA+A+ GE   C+ AGMN  + KP     L
Sbjct: 981  IIAMTASAMMGERDKCIEAGMNDYITKPIVAERL 1014