Pairwise Alignments

Query, 566 a.a., glutamate--tRNA ligase from Pseudomonas simiae WCS417

Subject, 582 a.a., Glutaminyl-tRNA synthetase (EC 6.1.1.18) from Xanthomonas campestris pv. campestris strain 8004

 Score =  672 bits (1734), Expect = 0.0
 Identities = 330/582 (56%), Positives = 416/582 (71%), Gaps = 26/582 (4%)

Query: 4   PTVDPTSNSKAGPAVPVNFLRPIIQADLDSGKHTQIVTRFPPEPNGYLHIGHAKSICVNF 63
           P  D T+     PA   +F+R I++ DL SGKHT I TRFPPEPNGYLHIGHAK+IC++F
Sbjct: 8   PATDATA-----PAEKKDFIRQIVREDLASGKHTAIRTRFPPEPNGYLHIGHAKAICLDF 62

Query: 64  GLAQEFGGVTHLRFDDTNPAKEDQEYIDAIESDIKWLGFEWSGEVRYASKYFDQLFDWAV 123
           GLA EFGG+ +LR DDTNPAKED E++ AI+ D++WLGFEW+ ++R+AS YF+  +  A 
Sbjct: 63  GLAAEFGGLCNLRLDDTNPAKEDPEFVVAIQDDVRWLGFEWA-QLRHASDYFEVYYLAAE 121

Query: 124 ELIKAGKAYVDDLTPEQAKEYRGTLTEPGKNSPFRDRSVEENLDWFARMRAGEFPDGARV 183
           +LI+ G A+V DL+ EQ ++YRGTLTEPG+NSPFR+RSV+ENLD F RMRAGEFPDGAR 
Sbjct: 122 KLIRDGHAFVCDLSAEQVRQYRGTLTEPGRNSPFRERSVDENLDLFRRMRAGEFPDGART 181

Query: 184 LRAKIDMASPNMNLRDPIMYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTL 243
           LRAKIDMAS N+NLRDP +YRI+H  H  TG+ W IYP YDF H   DA+EGITHS+CTL
Sbjct: 182 LRAKIDMASGNINLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGDAVEGITHSLCTL 241

Query: 244 EFESHRPLYEWFLDSLPVPAHP------------------RQYEFSRLNLNYTITSKRKL 285
           EFE HRPLY+W +D + +  HP                  RQ EFSRLN+NYT+ SKRKL
Sbjct: 242 EFEDHRPLYDWCVDKVDLSGHPELLAPLLGKGYPKEAAKPRQIEFSRLNINYTVMSKRKL 301

Query: 286 KQLVDEKHVHGWDDPRMSTLSGFRRRGYTPASIRNFCDMVGTNRSDGVVDFGMLEFSIRQ 345
             LV+E+ V GWDDPRM TL G RRRGYTPA++R F D VG ++ + V+DF +LE  +R+
Sbjct: 302 TALVEEQLVDGWDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSVIDFSVLEGCLRE 361

Query: 346 DLDANAPRAMCVLRPLKVVITNYPEDKVDHLELPRHPQKEELGVRKLPFAREIYIDRDDF 405
           DLDA A R M V+ PLK+V+TN PE   + L+   HP+ E  G R++PFARE++I+R+DF
Sbjct: 362 DLDAAAARRMAVIDPLKLVLTNLPEGHTETLQFSNHPKDESFGTREVPFARELWIEREDF 421

Query: 406 MEEPPKGYKRLEPNGEVRLRGSYVIRADEAIKDADGNIVELRCSYDPDTL-GKNPEGRKV 464
            E PPKG+KRL P GE+RLRG+ + R DE IKDA G IVELR   DP++  G     RKV
Sbjct: 422 AEVPPKGWKRLVPGGEIRLRGAGIARVDEVIKDAAGEIVELRGWLDPESRPGMIGSNRKV 481

Query: 465 KGVIHWVPAAASIECEVRLYDRLFRSPNPEKAEDSASFLDNINPDSLQVLTGCRAEPSLA 524
           KG IHWV A  ++E E+RLYDRLF    P+   +  ++ D +NP+S + + G   EPS A
Sbjct: 482 KGTIHWVSAVHAVEAEIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRSVRG-YVEPSAA 540

Query: 525 DAQPEDRFQFEREGYFCADIKDSKPGQPVFNRTVTLRDSWGQ 566
            A PE  FQFER GYF AD +D     P FNR+VTLRD+W +
Sbjct: 541 QAAPEQAFQFERTGYFVADRRDHSAATPAFNRSVTLRDTWAK 582