Pairwise Alignments

Query, 566 a.a., glutamate--tRNA ligase from Pseudomonas simiae WCS417

Subject, 556 a.a., glutaminyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  685 bits (1768), Expect = 0.0
 Identities = 336/549 (61%), Positives = 405/549 (73%), Gaps = 8/549 (1%)

Query: 19  PVNFLRPIIQADLDSGKHTQIVTRFPPEPNGYLHIGHAKSICVNFGLAQEFGGVTHLRFD 78
           P NF+R II  DL+SGKHT++ TRFPPEPNGYLHIGHAKSIC+NFGLAQ++ G+ +LRFD
Sbjct: 10  PSNFIRNIIDEDLESGKHTRVHTRFPPEPNGYLHIGHAKSICLNFGLAQDYKGLCNLRFD 69

Query: 79  DTNPAKEDQEYIDAIESDIKWLGFEWSGEVRYASKYFDQLFDWAVELIKAGKAYVDDLTP 138
           DTNP KED +Y+++I++D+ WLGF+W GE+RY+S YFDQL  +AVELI  G AYV  L  
Sbjct: 70  DTNPEKEDIDYVNSIQADVHWLGFQWDGEIRYSSNYFDQLHQYAVELINKGLAYVCFLNG 129

Query: 139 EQAKEYRGTLTEPGKNSPFRDRSVEENLDWFARMRAGEFPDGARVLRAKIDMASPNMNLR 198
           EQ +EYRGTL EPGKNSP+RD  VEENL+ F +MR GEF +G   LRAKIDMASP M +R
Sbjct: 130 EQTREYRGTLKEPGKNSPYRDTFVEENLELFEKMRKGEFKEGECALRAKIDMASPFMCMR 189

Query: 199 DPIMYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTLEFESHRPLYEWFLDS 258
           DP++YRIR AHHHQTGDKWCIYP YDFTH  SDA+E ITHS+CTLEF+ +R LY+W LD+
Sbjct: 190 DPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEDITHSLCTLEFQDNRRLYDWVLDN 249

Query: 259 L---PVPAHPRQYEFSRLNLNYTITSKRKLKQLVDEKHVHGWDDPRMSTLSGFRRRGYTP 315
           L     P   RQYEFSRLNL YT+ SKRKL  LV    V GWDDPRM T++G RRRGYTP
Sbjct: 250 LDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVVRGLVSGWDDPRMPTIAGLRRRGYTP 309

Query: 316 ASIRNFCDMVGTNRSDGVVDFGMLEFSIRQDLDANAPRAMCVLRPLKVVITNYPEDKVDH 375
           A+IR FC  +G  + + +V+  ML+  IR++L+ +APRAM V+ P+KV+I NYPE +V+ 
Sbjct: 310 AAIREFCRRIGVTKQENMVEVSMLDACIREELNEHAPRAMAVINPVKVIIENYPEGQVEK 369

Query: 376 LELPRHPQKEELGVRKLPFAREIYIDRDDFMEEPPKGYKRLEPNGEVRLRGSYVIRADEA 435
           L  P HP  E +G R+L F RE+YID DDF EE  K YKRL    EVRLR +YVI+A+  
Sbjct: 370 LSAPAHPTIESMGERELVFGRELYIDADDFREEANKKYKRLIQGKEVRLRNAYVIKAERC 429

Query: 436 IKDADGNIVELRCSYDPDTLGKNP-EGRKVKGVIHWVPAAASIECEVRLYDRLFRSPNPE 494
            KD  GN+  + C+YD  TLGKNP +GRKVKGVIHWV A +++  E RLYDRLF  PNP 
Sbjct: 430 DKDEAGNVTTIYCTYDDQTLGKNPADGRKVKGVIHWVEATSAVPAEFRLYDRLFNQPNPA 489

Query: 495 KAEDSASFLDNINPDSLQVLTGCRAEPSLADAQPEDRFQFEREGYFCADIKDSKPGQPVF 554
            AE     L   NP SL V  G   EP L +A+ E  +QFEREGYFCAD KDS P   VF
Sbjct: 490 AAETVDEVL---NPKSLVVKHGL-VEPGLVNAEAEKAYQFEREGYFCADSKDSSPEHLVF 545

Query: 555 NRTVTLRDS 563
           N TV LRDS
Sbjct: 546 NLTVALRDS 554