Pairwise Alignments

Query, 566 a.a., glutamate--tRNA ligase from Pseudomonas simiae WCS417

Subject, 556 a.a., glutaminyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  682 bits (1759), Expect = 0.0
 Identities = 335/550 (60%), Positives = 407/550 (74%), Gaps = 8/550 (1%)

Query: 19  PVNFLRPIIQADLDSGKHTQIVTRFPPEPNGYLHIGHAKSICVNFGLAQEFGGVTHLRFD 78
           P NF+R II  DL SGKHT + TRFPPEPNGYLHIGHAKSIC+NFG+A+++ G+ +LRFD
Sbjct: 10  PSNFIRNIIDEDLKSGKHTNVQTRFPPEPNGYLHIGHAKSICLNFGIARDYQGLCNLRFD 69

Query: 79  DTNPAKEDQEYIDAIESDIKWLGFEWSGEVRYASKYFDQLFDWAVELIKAGKAYVDDLTP 138
           DTNP KED +Y+++I++D++WLGF+W GEVRY+S YFDQL  +AVELI  G AYV  L  
Sbjct: 70  DTNPEKEDIDYVNSIQADVRWLGFQWDGEVRYSSNYFDQLHQYAVELINKGLAYVCFLNA 129

Query: 139 EQAKEYRGTLTEPGKNSPFRDRSVEENLDWFARMRAGEFPDGARVLRAKIDMASPNMNLR 198
           ++ +EYRGTL EPGKNSP+RD  VEENL  F +MR GEF +G   LRAKIDMASP M +R
Sbjct: 130 DETREYRGTLKEPGKNSPYRDTPVEENLRLFGKMRLGEFKEGECALRAKIDMASPFMCMR 189

Query: 199 DPIMYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTLEFESHRPLYEWFLDS 258
           DP++YRIR AHHHQTGDKWCIYP YDFTH  SDA+E ITHS+CTLEF+ +R LY+W LD+
Sbjct: 190 DPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEHITHSLCTLEFQDNRRLYDWVLDN 249

Query: 259 L---PVPAHPRQYEFSRLNLNYTITSKRKLKQLVDEKHVHGWDDPRMSTLSGFRRRGYTP 315
           L     P   RQYEFSRLNL YT+ SKRKL  LV  K V GWDDPRM T++G RRRGYTP
Sbjct: 250 LDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVTRKLVTGWDDPRMPTIAGLRRRGYTP 309

Query: 316 ASIRNFCDMVGTNRSDGVVDFGMLEFSIRQDLDANAPRAMCVLRPLKVVITNYPEDKVDH 375
           ASIR FC  +G  + + +++  ML+  IR++L+ +APRAM VLRPLKVVI NYPE +++ 
Sbjct: 310 ASIREFCQRIGITKQENMIEAAMLDACIREELNEHAPRAMAVLRPLKVVIENYPEGQIET 369

Query: 376 LELPRHPQKEELGVRKLPFAREIYIDRDDFMEEPPKGYKRLEPNGEVRLRGSYVIRADEA 435
           ++   HP  E +G R+L F REI+ID  DF EE  K YKRL    EVRLR +YVI+A+  
Sbjct: 370 IQAASHPSDESMGTRELAFGREIFIDVADFREEANKQYKRLVMGKEVRLRNAYVIKAERC 429

Query: 436 IKDADGNIVELRCSYDPDTLGKNP-EGRKVKGVIHWVPAAASIECEVRLYDRLFRSPNPE 494
            KD++GNI  + CSYD DTLGKNP +GRKVKGVIHWV A  +   + RLY RLF  PNP 
Sbjct: 430 DKDSEGNITTVYCSYDADTLGKNPADGRKVKGVIHWVEATTAKPAQFRLYQRLFTDPNPA 489

Query: 495 KAEDSASFLDNINPDSLQVLTGCRAEPSLADAQPEDRFQFEREGYFCADIKDSKPGQPVF 554
            AE     L   NP+SL+V+ G   E SLA+A  E  +QFEREGYFCAD KDS     VF
Sbjct: 490 AAETVDEVL---NPNSLEVVNGL-VEASLANAPAEKAYQFEREGYFCADNKDSSADHLVF 545

Query: 555 NRTVTLRDSW 564
           N TV LRDS+
Sbjct: 546 NLTVALRDSF 555