Pairwise Alignments

Query, 260 a.a., short-chain dehydrogenase from Pseudomonas simiae WCS417

Subject, 248 a.a., 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  103 bits (256), Expect = 4e-27
 Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 23/261 (8%)

Query: 1   MSFDLGLTGLRALVTGGTKGIGAAVVAVLQAQGAQVVSVARSAVVSPPEGVHFIAADLGT 60
           MS +L L G  ALVTG ++GIG A+   L   GA V+  A S   +     +      G 
Sbjct: 1   MSINLSLAGKVALVTGASRGIGRAIAETLVEAGAVVIGTATSEKGAAAIQEYLGDKGFGL 60

Query: 61  AAGCTSATQV------VKEQFGGVDIIVNVLGGSSAPGGGFAVLDDEQWANALNQNLMAA 114
               T +  V      +KE+ G VDI+VN  G +         + D++W + ++ NL + 
Sbjct: 61  VLNVTDSQSVTDLFDSIKEKAGDVDILVNNAGITR--DNLLMRMKDDEWNDIIDTNLTSL 118

Query: 115 VRVDRALLPGMVERGAGVIIHVTSIQRELPLPESTTAYAAAKAALATYSKSLSKEVTPKG 174
            R+ + ++  M+++  G II++ S+   +        Y+AAKA L  ++KSL++EV  + 
Sbjct: 119 FRLSKPVMRTMMKKRFGRIINIGSVVGTMGNAGQVN-YSAAKAGLIGFTKSLAREVASRQ 177

Query: 175 VRVVRVSPGWVETDAAVALAERLADEAGTDYAGGKQIIMQALGGIPLGRPAKPEEVADLI 234
           + V  ++PG+++TD        + DE   D    K I+ Q    +P+ R  + +E+A+ +
Sbjct: 178 ITVNAIAPGFIQTD--------MTDELTEDQQ--KAIMSQ----VPMERLGQAQEIANAV 223

Query: 235 AFLVSPRAASISGTEYVIDGG 255
            FL S  AA I+G    ++GG
Sbjct: 224 LFLASDSAAYITGETLHVNGG 244