Pairwise Alignments

Query, 560 a.a., monovalent cation/H+ antiporter subunit D from Pseudomonas simiae WCS417

Subject, 487 a.a., NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 113/505 (22%), Positives = 200/505 (39%), Gaps = 81/505 (16%)

Query: 7   LIVAPILLPLLTAALMLMLGEKRRPLKAKINLFSSVIGLGIAILLLYWTQKGGPGSIGVY 66
           + +AP+L+   T  ++++    RR       L  SV GL +A+L +    K  P ++   
Sbjct: 9   IALAPLLITSATIIVVMLAIAWRRNHSQTFLL--SVAGLNLALLSILPALKVAPLAVTP- 65

Query: 67  LPGNWQVPFGIVLVVDQLSALMLVLTGIIGVSALLFAMARWDRAGTSF----HALFQIQM 122
                      ++ +D  + L + L  +  ++ +  A A     G+ +      L+ + +
Sbjct: 66  -----------LMQIDSFACLYMALILVATLACVTLAHAYLGDGGSGYPGNREELYLLIL 114

Query: 123 MGLYGAFLTAD---LFNLFVFFEVLLAASYGLMLHGSGRAR-VSSGLHYIAINLLASSLF 178
           M   G  +      L +LF+  E+L    YGL+ +     R + +G+ Y+ ++   S+  
Sbjct: 115 MAAAGGLVLVSAQHLASLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSAFL 174

Query: 179 LIGAAMIYGVTGTLNFADLALKIPLV----PEADRGLLHAGAAILATAFLAKAGMWPLNF 234
           L G A++Y   GTL+F  +   +       P A  GL   G  ++  AF  K  + P + 
Sbjct: 175 LFGMALLYAEAGTLSFVGIGQALAATGLPSPIAQLGL---GMMLIGLAF--KLSLVPFHL 229

Query: 235 WLAPAYSSASAPVAAMFAIMTKVGVYTVLRLWTLLFSGQAGASALFGGDWLVYGGMATIL 294
           W    Y  A APVAA  A  +KV V+ V+     LF     AS+    + L    +A+IL
Sbjct: 230 WTPDVYEGAPAPVAAFLATASKVAVFAVM---VRLFQISPVASSGVLSNVLTIIAIASIL 286

Query: 295 CAGLAMVAAQRLERMASLSILVSAGILLSAVGFAQPSLTAGAL-FYLVSSTLALSALFLL 353
              L  +    L+R+   S +   G LL A+  A   L   A+  YLV+  +     F +
Sbjct: 287 FGNLLALTQSNLKRLLGYSSIAHFGYLLIAL-IASKGLAVEAIGVYLVTYVITSLGAFGV 345

Query: 354 AELIERSRSANDLPLDEEIDALPKAMESLHPRPGVNLDDEQKAVVGQVIPWTMAFLGLSF 413
             L+    +  D              ++L+   G              + W   +L    
Sbjct: 346 ITLMSSPYNGRD-------------ADALYEYRG--------------LFWRRPYLTAVL 378

Query: 414 VACALLIIGMPPLSGFIGKLSLLSALVNPLGLGVSIDAPIRPAAWGLVALLILSGLASLI 473
               L + G+P  +GFIGK  +++               +    W LV  L+L     + 
Sbjct: 379 TVMMLSLAGIPLTAGFIGKFYIIA-------------TGVEAHQWWLVGSLVLGSAIGVF 425

Query: 474 AFARLGIQRFWTPEERPSPLLRRYE 498
            + R+ +  +        P LRR++
Sbjct: 426 YYLRVMVTLYLM-----EPNLRRHD 445