Pairwise Alignments

Query, 560 a.a., monovalent cation/H+ antiporter subunit D from Pseudomonas simiae WCS417

Subject, 502 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  162 bits (410), Expect = 3e-44
 Identities = 139/499 (27%), Positives = 233/499 (46%), Gaps = 66/499 (13%)

Query: 7   LIVAPILLPLLTAALMLMLGEKRRP-LKAKINLFSSVIGLGIAILLLYWTQKGGPGSIGV 65
           L +  +++PL+ A + ++L   RRP L     L  ++  L +A+ LL      GP +   
Sbjct: 6   LPILQVVVPLMAAPVCILL---RRPGLCWAWALLIALTTLTMAVGLLAGVLTHGPSA--- 59

Query: 66  YLPGNWQVPFGIVLVVDQLSALMLVLTGIIGVSALLFAMARWDRAG-------TSFHALF 118
           Y  G+W  P+GI L VD LSAL+LVL  +   ++L+   AR   A        T  + LF
Sbjct: 60  YHLGDWSPPWGIELHVDLLSALVLVL--VTATASLVIVYARASFAAEIDPGHHTLAYCLF 117

Query: 119 QIQMMGLYGAFLTADLFNLFVFFEVLLAASYGLMLHGSGRARVSSGLHYIAINLLASSLF 178
            + + GL G  +T D FNLFVF E+   +SY L+  G  R  + +  HY+ +  + ++ +
Sbjct: 118 LLCLTGLLGMAITGDAFNLFVFLEISSLSSYALVALGRDRRALYAAYHYLILGTVGATFY 177

Query: 179 LIGAAMIYGVTGTLNFADLALKIPLVPEADRGLLHAGAAILATAFLAKAGMWPLNFWLAP 238
           +IG   +Y +TGTLN  DLA ++P V  +   +  AG   L      K  ++PL+ WL  
Sbjct: 178 VIGIGFLYMMTGTLNMNDLAQRLPAVAHSRTAV--AGVVFLGVGLSLKLALFPLHKWLPA 235

Query: 239 AYSSASAPVAA-MFAIMTKVGVYTVLRLWTLLFSGQAGASALFG----GDWLVYGGMATI 293
           AYS A + V A + A  TKV  Y ++RL+  + +    A+ L G     + ++   +A I
Sbjct: 236 AYSYAPSAVGAFLAATSTKVAFYVMVRLFLGVLAPAFSANLLPGPVSAREMVMVLALAAI 295

Query: 294 LCAGLAMVAAQRLERMASLSILVSAGILLSAVGFAQPSLTAGALFYLVSSTLALSALFLL 353
           L    + +     +R+ + S +   G+++  +        AG L ++++  L  ++LF+ 
Sbjct: 296 LSGSFSAIFQSDAKRLLAYSSVSQIGVMVLGLSLFSLDGVAGGLVHMLNHALIKASLFM- 354

Query: 354 AELIERSRSANDLPLDEEIDALPKAMESLHPRPGVNLDDEQKAVVGQVIPWTMAFLGLSF 413
                                   A+  +  R G +++    A +G+ +PWTMA    +F
Sbjct: 355 ------------------------ALGCVFLRIG-SVEIADMAGIGRRMPWTMA----AF 385

Query: 414 VACALLIIGMPPLSGFIGKLSLLSALVNPLGLGVSIDAPIRPAAWGLVALLILSGLASLI 473
           V   L +IG+P  +GFI K  L               + I    W  VA LI S L +++
Sbjct: 386 VIGGLSLIGIPGTAGFISKWQL-------------AQSAIAEGWWLAVAALIASSLLAVV 432

Query: 474 AFARLGIQRFWTPEERPSP 492
              ++    ++ P    SP
Sbjct: 433 YVGKVIEAAYFRPSPAESP 451