Pairwise Alignments

Query, 415 a.a., transporter from Pseudomonas simiae WCS417

Subject, 450 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

 Score =  105 bits (263), Expect = 2e-27
 Identities = 98/360 (27%), Positives = 161/360 (44%), Gaps = 26/360 (7%)

Query: 24  LRSPASDPVGTQEQWQAVKPEALVHQIGLVGKIEPDTTITLTAPFDGNVQANLVEQGQRV 83
           LRS AS+ V        VK E L  ++   G I P  T+ L+    G +   LVEQGQ+V
Sbjct: 41  LRSRASEAV-LDRYTVPVKVETLQEKVTASGSIVPIRTVNLSPKTAGLLVEVLVEQGQKV 99

Query: 84  EAGQVLLRMDPATLEVQLRDALSAQLKARRTVQEMQDWDNGPTVTRARRSLRTVEMTAGN 143
           + GQ++ RMD   L  Q   A +A   A+  +Q +++      + + R ++R  +  A  
Sbjct: 100 QQGQLIARMDNRELRAQQLQARAALAAAQAQLQVLRNGTRPEVLDQGREAIRQAQAAAQQ 159

Query: 144 -------TQRKLTESENLFKRGIIPRNELDDLKQQTQQQQLDLASARSEL------QQAI 190
                   Q++L   E L   G I R   D       +    L  A   L      QQ +
Sbjct: 160 AAARRALAQQELKRQEALVGEGAIARQAYDRALTDAAETDAALQQAIGRLREVERRQQEL 219

Query: 191 DQG-KGEYRQIADMELTNATVKYDALHKLLEGKEVKAPFSGIVVPPPGNNSPQAGGNNTA 249
             G + E  + A+  +  A  +  ++   L   E++APFSGI+     +      G    
Sbjct: 220 QNGARPEEVRQAEARVGEAIGRLQSVEVQLADTEIRAPFSGIITQRYAD-----PGAFVT 274

Query: 250 PVQAGSKVSQGQVLFGLANIERLKIVAKVSELDINQLHQGQAVEVLGDGFDGERLTGSVS 309
           P  + S  +       +A  E L+++A+V E+DI+++  GQ+V+V  D F  +   G V 
Sbjct: 275 PTTSASATASATSTSIVALAEGLEVLAQVPEVDISRIRVGQSVQVRVDAFPTQTFEGKVR 334

Query: 310 VVSGLAIAGDSQGSAQFPVTLSIPKLTPQQLQRVRLGMSARLTIVTYNNAQAIVIPSQAI 369
           +V+  A+   +  S Q  VTL   +       ++  GM+A L  +  +  +A+VIP+ AI
Sbjct: 335 LVAPEAVEEQNVTSFQVRVTLQTGQ------NQLGSGMNADLDFIGRSLPRALVIPTVAI 388