Pairwise Alignments

Query, 415 a.a., transporter from Pseudomonas simiae WCS417

Subject, 342 a.a., multidrug transporter subunit MdtN from Klebsiella michiganensis M5al

 Score = 60.8 bits (146), Expect = 6e-14
 Identities = 79/319 (24%), Positives = 123/319 (38%), Gaps = 61/319 (19%)

Query: 61  TITLTAPFDGNVQANLVEQGQRVEAGQVLLRMDPATLEVQLRDALSAQLKARRTVQEMQD 120
           TI +     G +    +   QRV+ G +L R+DP   +  L DA     KAR T  + Q 
Sbjct: 48  TIDVVPEVSGRIVEMPIRDNQRVKKGDLLFRIDPRPYQAMLDDA-----KARLTTLDAQ- 101

Query: 121 WDNGPTVTRARRSLRTVEMTAGNTQRKLTESENLFKRGIIPRNELDDLKQQ--TQQQQLD 178
                 +   +R+++  E  A +    +  ++ L K+    R  L+ L  Q    Q+ LD
Sbjct: 102 ------IMLTQRTIKAQEYNAQSVSAAVERAKALVKQTTSSRIRLEPLVPQGFASQEDLD 155

Query: 179 LA-----SARSELQQAIDQGK-------GEYRQIADMELTNATVKYDALHKLLEGKEVKA 226
            A     +AR+EL+  + Q K       G    +A      A +    LH  LE  EV+A
Sbjct: 156 QARTAEKAARAELEATLLQAKQASAAVTGVDAMVAQRAGILAQIALAELH--LEFTEVRA 213

Query: 227 PFSGIVVPPPGNNSPQAGGNNTAPVQAGSKVSQGQVLFGLANIERLKIVAKVSELDINQL 286
           PF+G+VV                    G   S  + +F L + +   +VA   E D+  +
Sbjct: 214 PFNGVVV--------------ALKTTIGQYASALKPVFTLLDDDHWYVVANFRETDLQNV 259

Query: 287 HQGQAVEVLGDGFDGERLTGSV------------SVVSGLAIAGDS----QGSAQFPVTL 330
             G    +      G    G V            SV+ GL +   S      S +FPV +
Sbjct: 260 RPGVPARITVMTNHGRTFEGVVDSVGTGVLPDGGSVIEGLPVIQKSINWVHVSQRFPVKI 319

Query: 331 SIPKLTPQQLQRVRLGMSA 349
           ++    P      R+G SA
Sbjct: 320 AVKDPDPALF---RMGASA 335