Pairwise Alignments

Query, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 425 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 20/247 (8%)

Query: 177 LGDRVRINDYLFLIVGILRSQPRAMLMPVQANESLFIPAEGMRRIYATPQIGNLIIRAAP 236
           +G   +I  + F ++G+L      +      + S F P    +R +    I  + +    
Sbjct: 181 VGQIAKIGAHEFTVIGVLAKNSGNIEQGSPIDYSGFTPFSTWQRFHPNQAISGINLEPRV 240

Query: 237 GQDMERIAKNVAVALQPQLTDHDVDIQVPQQMIDGMTRQSRTFAYLLLA-----LGAISL 291
           G D + +A  V   L+ +      D Q+       ++++S     L L      +G I+L
Sbjct: 241 GSDRQALAATVQQVLKRKYAASLQDQQIVMVQDHFLSQKSMQQFLLRLQSFLGIIGFITL 300

Query: 292 VGGGVGVMNVMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCGAVLGLT 351
               +G+ NVM   V    R+IG+RMA+GA    IR  +L +++    +G + G  LG+T
Sbjct: 301 AVASLGITNVMFATVKRATRDIGVRMAVGATPNTIRCHYLAQSLITMGMGGIAG--LGVT 358

Query: 352 AAW-------------LYAWLSGWEFALAIAALPLGVGSTLLVGLFFGIYPAVSASRLQP 398
            A              +Y  L      L+++ + + + +  ++G+     PA  A+++ P
Sbjct: 359 FAMVRLLAAIPLQGNPIYDHLGQPVPELSLSVIVIVIVTITVMGIVAAWLPANHAAKVTP 418

Query: 399 VEALRDE 405
           ++AL+ E
Sbjct: 419 LQALQSE 425