Pairwise Alignments

Query, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 93.6 bits (231), Expect = 9e-24
 Identities = 107/412 (25%), Positives = 179/412 (43%), Gaps = 42/412 (10%)

Query: 18  LLHEAFVSLRTLGKRSILALLGIVIGSSSVVALINIGHNAAVDAAMIFKDMGTDTLIAQF 77
           LL +++ +L     +S+LA+  I  G  SVV L+ +G          F+ +  +T +   
Sbjct: 4   LLQQSWQTLLAHRLKSVLAITAISWGVISVVILMALGEGFYRAQTESFRFLLQETQMVAS 63

Query: 78  PPKGASTVPMPARLDLDAVRQTVPGIAHVGALTLFSGPIVFHGRTVN-----ANLVGSTP 132
                    MPAR  +      +  +A    +  +S  IV+  R V+        +GS  
Sbjct: 64  GQTSEVWQGMPARRPIQLTESLMREVAQRPEIQRYS--IVYENREVSITQQRGTAIGSMV 121

Query: 133 DIKD-------AMRLALQQGRF-LSGFDANETYGVIGDQVAQSLGAPGDPLRLGDRVRIN 184
              D        ++L L    F L     +    ++GD VA +       L++GD  +I 
Sbjct: 122 SGVDRGYFSLAGLKLTLGSRDFSLHDQHNHRRVAILGDHVAAT-----SQLKIGDEFKIR 176

Query: 185 DYLFLIVGILRSQPRAMLMPVQANESLFIPAEGMRRIYATPQIGNLIIRAAPGQDM---- 240
              F ++GI+  +  +       N+ +FIP+   + I+ T Q   +++  A G       
Sbjct: 177 GIAFRVIGIMDDE--SSRFSFGDNQKVFIPSSTFKDIWDT-QPNMMLVLPAQGVSSWALR 233

Query: 241 ERIAKNVAVALQPQLTDHDV----DIQVPQQMIDGMTRQSRTFAYLLLALGAISLVGGGV 296
           E++    A  L     D +     D      +I  + R  + F   L A G +++  G +
Sbjct: 234 EQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAF---LAASGMMTMAVGIL 290

Query: 297 GVMNVMLMNVSERRREIGIRMALGARQRDIRNLFLLEAVTLTAVGALCG------AVLGL 350
           GV N+M + V+ER REIG+R+A+GA  + I+  FLLE + L  +GAL G       VL L
Sbjct: 291 GVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGALVGLLLAYFGVLLL 350

Query: 351 TAAWLYAWLSGWEFALAIAALPLGVGSTLLVGLFFGIYPAVSASRLQPVEAL 402
               L  WL   E  +    + L +  T ++ L    +PA  A++L+PV AL
Sbjct: 351 NHLGLPTWLG--EPVITSTTVWLSMLVTSILALAAAYFPARRAAQLEPVIAL 400