Pairwise Alignments

Query, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  110 bits (274), Expect = 9e-29
 Identities = 94/395 (23%), Positives = 177/395 (44%), Gaps = 38/395 (9%)

Query: 32  RSILALLGIVIGSSSVVALINIGHNAAVDAAMIFKDMGTDTLIAQFPPKGASTVPMPARL 91
           +S L ++G+VIG  ++V+LI++G             +G + +I+  P +      +    
Sbjct: 20  QSFLTIIGVVIGILAIVSLISLGFGVQNYITSEITTIGAN-VISVLPSQNFGGPAVSKNF 78

Query: 92  ---DLDAVRQTVPGIAHVGALTLFSGPIVFHGRTVNANLVGSTPD-----IKDAMRLALQ 143
              D+ AVR  V G+  V A    S  + +  ++   N++   P                
Sbjct: 79  NDNDVSAVRN-VRGVEEVVAAWFGSYELEYRDQSHYGNVLVIEPSKFTHVYSKTWGYEPY 137

Query: 144 QGRFLSGFDANETYGVIGDQVAQSLGAPGDPLRLGDRVRINDYLFLIVGILRSQPRAMLM 203
           +GR++   D+++   +IG  +A +  +    + +GD++ IND  + ++GIL         
Sbjct: 138 KGRWIE--DSDKYSCMIGYALATN--SFDREIDIGDKITINDKKYKVIGILEETGN---- 189

Query: 204 PVQANESLFIPAEGMRRIYATPQIGNLIIRAAPGQDMERIAKNVAVALQPQLTDHDVDIQ 263
           P   N  +     G        +   +I+    G+D+  +++ +   L+    D +  + 
Sbjct: 190 PRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVL 249

Query: 264 VPQQMIDGMTRQSRTFAYLLLALGAISLVGGGVGVMNVMLMNVSERRREIGIRMALGARQ 323
             +Q+ + +          L+ +  ISL+ G VG+ N M M++ ERR++IGI  ALGA  
Sbjct: 250 TAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAEN 309

Query: 324 RDIRNLFLLEAVTLTAVGALCGAVLGLTAA-------------WLYAWLSGWEFALAIAA 370
             I ++F++EA  L   G + G +LG+  A              + AW+S WE  + +  
Sbjct: 310 TTILSIFVVEAGFLGLFGGIVGTMLGILIAKAIEYIAAISGYGLIRAWIS-WELIVGVLV 368

Query: 371 LPLGVGSTLLVGLFFGIYPAVSASRLQPVEALRDE 405
                  + +VG+  G +PA S ++L PV+ LR E
Sbjct: 369 F------SFVVGILSGYFPARSGAKLNPVDTLRGE 397