Pairwise Alignments

Query, 405 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score =  124 bits (311), Expect = 5e-33
 Identities = 98/396 (24%), Positives = 190/396 (47%), Gaps = 40/396 (10%)

Query: 32  RSILALLGIVIGSSSVVALINIGHNAAVDAAMIFKDMGTDTLIAQFPPKGASTVPMPARL 91
           +S+L ++GIVIG  ++V+LI++G+             G  ++I  +P +  +++ M    
Sbjct: 20  QSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGA-SVITVYPSQQITSIAMSKNF 78

Query: 92  ---DLDAVRQTVPGIAHVGALTLFSGPIVFHGRTVNANLVGSTPD-----IKDAMRLALQ 143
              DL AV + V G+  V         + +H +   +++  +          +A    L+
Sbjct: 79  NDRDLKAV-EDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIFFTEAYGYELE 137

Query: 144 QGRFLSGFDANETYGVIGDQVAQSLGAPGDPLRLGDRVRINDYLFLIVGILRSQPRAMLM 203
           +GR++   D+++   VIG  +A         + +GD++ IND  + +VGIL       + 
Sbjct: 138 KGRWMK--DSDKYTCVIGYSLAHDTF--DREIDIGDKIEINDKKYKVVGILEQ-----IG 188

Query: 204 PVQANESLFIPAEGMRRIYATPQIGNL-IIRAAPGQDMERIAKNVAVALQPQLTDHDVDI 262
               + S+ IP E    ++      N+ +++   G+D+ ++++++   L+    D +  +
Sbjct: 189 NPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELEDSRGDENFSV 248

Query: 263 QVPQQMIDGMTRQSRTFAYLLLALGAISLVGGGVGVMNVMLMNVSERRREIGIRMALGAR 322
              +Q+ + ++         L+ +  ISL+ G VG+ N M M++ ERR++IGI  ALGA 
Sbjct: 249 LTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAE 308

Query: 323 QRDIRNLFLLEAVTLTAVGALCGAVLGLTAA-------------WLYAWLSGWEFALAIA 369
              I ++F++EA  L   G + G +LG+  A              + AW+S WE  + + 
Sbjct: 309 NNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWIS-WELIVGVL 367

Query: 370 ALPLGVGSTLLVGLFFGIYPAVSASRLQPVEALRDE 405
                   + +VG+  G +PA S ++L PV+ LR E
Sbjct: 368 VF------SFVVGILSGYFPARSGAKLNPVDTLRGE 397