Pairwise Alignments
Query, 510 a.a., NADH:ubiquinone oxidoreductase subunit M from Pseudomonas simiae WCS417
Subject, 1265 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H
Score = 130 bits (326), Expect = 4e-34
Identities = 101/383 (26%), Positives = 177/383 (46%), Gaps = 28/383 (7%)
Query: 116 FFHLNLMWILGGVVGVFLALDLFMFFFFWEMMLVPMYFLIALWGHSSSDGKKTRIYAATK 175
FF L LM +G ++GV L F+ FWE+M Y L+ + + A K
Sbjct: 311 FFFLFLM--IGSLIGVATTNHLGNFYLFWELMTWMSYLLVI------HEQTAKALKAGMK 362
Query: 176 FFIFTQASGLIMLVAILGLVLVNFNNTGVITFNYADLLKTKMSLTTEY--ILMLGFFIAF 233
+F+ + +M IL L + + TF +++ +L+ +++ F I F
Sbjct: 363 YFLICASGAYVMHFGILVL------HAQLGTFEISEIAPCIGTLSPALAGVVLATFLIGF 416
Query: 234 AVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFP-NASAEFAPIA 292
K + P +SWLP+AH AP++ S ++GIL K G+++ +F A +F A
Sbjct: 417 MAKAGLFPLYSWLPEAHPVAPSSISGPMSGILTKAGILGMVKLLFGIFGVGALGQFGLFA 476
Query: 293 ---------MTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGA 343
+ LG I + G A+ QTDIKRL+A+S+++ +G + + + G+ LAL G
Sbjct: 477 GLSLPGAVLVALGGITLLLGEVQAYRQTDIKRLLAYSTLAQIGEITMVLGVGTSLALAGG 536
Query: 344 VIQMLAHGVSAAALFILSGQLYERLHTRDMREMGGVWSRIAYLPAISLFFAAASLGLPGT 403
+ + H V LF G L R R + ++ G+ + + A +G+P
Sbjct: 537 LFHVTNHAVMKTMLFFAVGALILRSAGRSLDDLKGLGKVMPFTGLCLGIGLLAIMGVPPF 596
Query: 404 GNFIGEFLILMGAF-VQTPWISAIATSGLVFGSVYSLIMIHRAYFGPAKSDTVLQGMDAR 462
G F+ +FL++ ++A+ G V G++Y ++ +F P V++
Sbjct: 597 GGFVSKFLMIYACVEAGQVGVAAVILVGSVIGALYYARVLRAVFFEPYTGPKVVEA-PLT 655
Query: 463 ELIMVLGLAVLLIYIGVYPQPFL 485
I + LA ++++ GVYP L
Sbjct: 656 MRIALGALAGVVVFTGVYPDAAL 678
Score = 124 bits (310), Expect = 3e-32
Identities = 110/416 (26%), Positives = 192/416 (46%), Gaps = 47/416 (11%)
Query: 91 MILLTGLLGILSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFMFFFFWEMMLVP 150
+I++ G + +L + FF +M I GG++GV + DLF FF FWE+M
Sbjct: 763 LIVVVGAINLLYSIGYMAHGHAQNRFFFFFVMMI-GGLLGVTASDDLFNFFAFWEVMSSW 821
Query: 151 MYFLIALWGHSSSDGKKTRIYAATKFFIFT--QASGLIMLVAILGLVLVNFNNTGVITFN 208
+L+ + + K + TK+FIF AS L + VAIL G TF
Sbjct: 822 TLYLVII-----HEETKDSLDEGTKYFIFNFVGASFLFLGVAILAA------KAG--TFE 868
Query: 209 YADLLKTKMSLTTEYI-----LMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAG 263
A L + +S+ ++ L+L + A +LP+ + P A APT S ++
Sbjct: 869 MALLPQAALSMPVGWLAVSAGLILAGLLMKAAQLPLRIDYQMHP---APAPTPVSGYISA 925
Query: 264 ILLKTAAYGLLRFALPLFPNASAEFAPIA-------------MTLGLIGIFYGAFLAFAQ 310
+LLK YG+L+ + L A A IA + + + Y +A Q
Sbjct: 926 VLLKVGPYGVLKIMVAL--GAGGGLARIAGLGAWMPDPLVVVQVIAALTVLYAGAMAVVQ 983
Query: 311 TDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAHGVSAAALFILSGQLYERLHT 370
+KRL+ +S+VS +G+VL+G+ GS L + G ++ + H + LF+ +G + + H
Sbjct: 984 NGVKRLLIYSTVSQLGYVLLGLSLGSALGVAGGLMHFVNHMMLKDILFLAAGCILAQAHV 1043
Query: 371 RDMREMGGVWSRIAYLPAISLFFAAASLGLPGTGNFIGEFLILMGAFVQTPWISAIATSG 430
+ ++GG+ ++ + LF + G+P F ++LI GAF ++ A+A
Sbjct: 1044 HSLDDLGGLGRKMPITFGLFLFAGLSLSGIPPFNGFASKWLIYQGAFQGGHYLLAMAA-- 1101
Query: 431 LVFGSVYSLIMI----HRAYFGPAKSDTVLQGMDARELIMVLG-LAVLLIYIGVYP 481
+ S+++L + H A+ GP +++ +G LA + +GV+P
Sbjct: 1102 -LMSSLFTLAAVLKFTHSAFLGPLSPAAATMREAPPVMLIPMGLLAAGSVIVGVFP 1156
Score = 50.4 bits (119), Expect = 4e-10
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 312 DIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAHGVSAAALFILSGQLYERLHTR 371
D+ R++ +S+++ +G+VL+G+ G+ GAV+ + + A + + + L R +
Sbjct: 28 DLARMLTYSTIAEIGYVLMGLGIGTAAGETGAVMHLGYQAIMRALVVVAAWHLIRRSGSS 87
Query: 372 DMREMGGVWSRIAYLPAISLFFAAASLGLPGTGNFIG---EFLILMGAFVQTPW-ISAIA 427
+ + G R +P +SL F + G F G +F+IL A W ++A+
Sbjct: 88 KLDALVGSVER---MPFVSLMFGFGLFSVMGLSPFKGSFSKFVILYAAIENGYWGLAAVG 144
Query: 428 TSGLVFGSVYSLIMIHRAYFGPAKSDTVLQGMDARELIMVLG------LAVLLIYIGVYP 481
T + + Y + I + F +S +L + +G LA++ + + + P
Sbjct: 145 TVASIIAAFYYIHTIQQVCF-QRQSHGILGDKPIPFFQIPVGQLPIVVLALVTVVMSLDP 203
Query: 482 QPFLDTSA 489
PFL +A
Sbjct: 204 DPFLMLAA 211