Pairwise Alignments

Query, 510 a.a., NADH:ubiquinone oxidoreductase subunit M from Pseudomonas simiae WCS417

Subject, 531 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  121 bits (304), Expect = 5e-32
 Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 8/195 (4%)

Query: 231 IAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAP 290
           I F  K  ++PFH+WLPDAH+Q+P+  S  L+G+ LK A Y + R A  LF         
Sbjct: 223 IGFGSKAGLIPFHAWLPDAHSQSPSPVSALLSGVTLKVAIYAIARIA-SLFYAGHGALGV 281

Query: 291 IAMTLGLIGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQLALQGAVIQMLAH 350
             + LG I +  G   AF+QTD+KRL+A+SSVS +G++++G+  GS L   GAV  ++ H
Sbjct: 282 FCIVLGAITMLGGIIAAFSQTDLKRLLAYSSVSQVGYIIMGLGIGSYLGFYGAVYHLMNH 341

Query: 351 GVSAAALFILSGQLYERLHTRDMREMGGVWSRIAYLPAISLFF---AAASLGLPGTGNFI 407
            +  A LF+ +G L     T  + E+G    +  + P ++L F   A A  G+P    F 
Sbjct: 342 ALDKAMLFLCTGLLLYSCGTTSIEELG----KRKHSPLVALCFFIGALAISGVPPLNGFW 397

Query: 408 GEFLILMGAFVQTPW 422
            +F I   A     W
Sbjct: 398 SKFAIYTAAAEAHLW 412