Pairwise Alignments

Query, 335 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas simiae WCS417

Subject, 328 a.a., NuoH2 NADH:ubiquinone oxidoreductase subunit 1 (chain H) from Sinorhizobium meliloti 1021

 Score =  270 bits (689), Expect = 5e-77
 Identities = 141/327 (43%), Positives = 208/327 (63%), Gaps = 17/327 (5%)

Query: 12  IISVVKAIVILLAVVVAGALL-----SFVERRLLGWWQDRYGPNRVGPFGMFQIAADMLK 66
           +I  +  IV  +A+V+A  LL     +++ER++ G  Q R GP RVG  G+ Q  AD +K
Sbjct: 3   LIVALGVIVFKVALVIAILLLLPLPLTWLERKIAGHMQQRMGPMRVGWHGLLQPVADGIK 62

Query: 67  MFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAIIPITP---------TWGVADLNIGLL 117
           +  KED  P  AD+ +F LAP++A++   + FA IP            T  +++LN+ LL
Sbjct: 63  LLTKEDHIPAEADRFLFKLAPILALAPPFVVFAAIPFGESVSVLGNEITLYISNLNVALL 122

Query: 118 FFFAMAGLSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQVGSFNMR 177
           F FA+ GL VY V+F GW++N+K+A+LGSLR  AQ +SYE+ MG A++G+V+   S ++ 
Sbjct: 123 FVFAVIGLEVYGVIFGGWAANSKYAVLGSLRTCAQMISYEIPMGFAVIGVVMLAQSMSLL 182

Query: 178 DIVEYQAQNLWFIIPQFFGFCTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAGMKWGM 237
           DIV  Q  ++W ++ Q  GF  FF+AG+A   R PFD  EAE +L  G+H EY+G+++ +
Sbjct: 183 DIVRAQT-DVWNVVYQPIGFFVFFVAGLAEAQRIPFDLAEAEGDLGAGFHTEYSGIRFAL 241

Query: 238 FFVGEYIGIILISALLVTLFFGGWHGPFGILPQLAFFWFFLKTAFFIMLFILLRASIPRP 297
           F V EY+ ++L+S L V LFFGGW+G    LP L   WF LK AFF+ LF+  R + PR 
Sbjct: 242 FMVSEYVVMVLVSVLTVILFFGGWNGVLIPLPPL--LWFLLKVAFFVYLFMWFRFTFPRY 299

Query: 298 RYDQVMDFSWRFCLPLTLINLLVTAAV 324
           RYDQ+M   W+  LPL+L N++++  V
Sbjct: 300 RYDQLMAIGWKVLLPLSLANIIISGVV 326