Pairwise Alignments

Query, 904 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 674 a.a., formate dehydrogenase H subunit alpha selenocysteine-containing from Methanococcus maripaludis S2

 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 14/187 (7%)

Query: 220 DMQFAPSICHGCSSGCNISPGERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNREDRP 279
           ++ F  +IC  C +GC +    + G L          VN+   C +G + + +V+R+DR 
Sbjct: 2   ELDFIHTICPYCGTGCGVDLVVKDGTLVGTNPFKRHPVNEGKTCIKGSYCHEFVHRDDRL 61

Query: 280 RQPLLAGGAKLSTDEALDKAAELLRGR-------NIVGIGSPRASLESNFALRELVGAEH 332
           + PL+    +L  + + D+A EL+ G+        +    S R + E N+  ++      
Sbjct: 62  KTPLIRKNGEL-VEASWDEALELISGKLQNYSPEEVGFFSSARCTNEDNYVFQKFARTVI 120

Query: 333 FYSGIE-AGELERIRLV--LQVLNDSPLPVPNMRDIEDHDAIFVLGEDLTQTAARIALSL 389
             + ++    L     V  L     S     ++ DIED D IF++G +  +    IA   
Sbjct: 121 KTNNVDHCARL*HSATVVGLGQAFGSGAMTNSISDIEDADCIFIIGSNTFEQHPLIA--- 177

Query: 390 RQSVKGK 396
           R+ V+ K
Sbjct: 178 RRVVRAK 184



 Score = 44.3 bits (103), Expect = 3e-08
 Identities = 27/71 (38%), Positives = 40/71 (56%)

Query: 561 VVLENDLYTRTDAAKVDAALDAAKVLIVADHQKTATSDRAHLVLPAATFAEGDGTLVSQE 620
           V+ EN + +  D   V+ AL +  +LIV D   T T+  A +VLP A++AE DGT  + E
Sbjct: 388 VMGENPMVSDPDIHHVEHALKSLDLLIVQDIFLTETAQVADVVLPGASWAEKDGTFSNTE 447

Query: 621 GRAQRFFQVFD 631
            R Q+  +  D
Sbjct: 448 RRIQKINKAVD 458