Pairwise Alignments

Query, 904 a.a., NADH dehydrogenase from Pseudomonas simiae WCS417

Subject, 909 a.a., NADH dehydrogenase I, G subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1155 bits (2987), Expect = 0.0
 Identities = 579/908 (63%), Positives = 699/908 (76%), Gaps = 7/908 (0%)

Query: 1   MATIHVDGKALEVDGADNLLQACLSLGLDIPYFCWHPALGSVGACRQCAVKQYTDENDTR 60
           MATI+VDGK  EVDGADNLLQACLSLGLD+PYFCWHPALGSVGACRQCAVKQY + +D R
Sbjct: 1   MATIYVDGKEYEVDGADNLLQACLSLGLDVPYFCWHPALGSVGACRQCAVKQYQNADDKR 60

Query: 61  GRIVMSCMTPATDNTWISIDDEESKAFRASVVEWLMTNHPHDCPVCEEGGHCHLQDMTVM 120
           GR+VMSCMTP+TD T+ISI+DEE+K FR  VVEW MTNHPHDCPVCEEGG CHLQDMTVM
Sbjct: 61  GRLVMSCMTPSTDGTYISIEDEEAKEFRKCVVEWQMTNHPHDCPVCEEGGACHLQDMTVM 120

Query: 121 TGHNERRYRFTKRTHQNQDLGPFISHEMNRCIACYRCVRFYKDYAGGTDLGVFGAHDNVY 180
           TGHN RRYRFTKRTHQNQDLGPFI+HEMNRCIACYRCVR+YKDYAGG DLGV+GAHDNVY
Sbjct: 121 TGHNSRRYRFTKRTHQNQDLGPFINHEMNRCIACYRCVRYYKDYAGGEDLGVYGAHDNVY 180

Query: 181 FGRVEDGVLESEFSGNLTEVCPTGVFTDKTHSERYNRKWDMQFAPSICHGCSSGCNISPG 240
           FGRVEDG LESEFSGNL EVCPTGVFTDKTHSERYNRKWDMQFAPSIC  CS GCNISPG
Sbjct: 181 FGRVEDGTLESEFSGNLVEVCPTGVFTDKTHSERYNRKWDMQFAPSICQQCSVGCNISPG 240

Query: 241 ERYGELRRIENRFNGSVNQYFLCDRGRFGYGYVNREDRPRQPLLAGGAK---LSTDEALD 297
           ERYGELRRIENRF+GSVN YFLCDRGRFGYGYVN  DRPRQP L  G +   ++ D AL+
Sbjct: 241 ERYGELRRIENRFHGSVNHYFLCDRGRFGYGYVNLPDRPRQPQLKNGNEQLAITVDGALN 300

Query: 298 KAAELLR-GRNIVGIGSPRASLESNFALRELVGAEHFYSGIEAGELERIRLVLQVLNDSP 356
           +AA+ LR  + ++GIGSPRASLESNFALRELVGA +FY G+E  E +  + +L +L    
Sbjct: 301 RAADALRNAKGVIGIGSPRASLESNFALRELVGANNFYVGVEQAEWQCQQQMLHILQHGG 360

Query: 357 LPVPNMRDIEDHDAIFVLGEDLTQTAARIALSLRQSVKGKAEDMADAMRVQPWLDAAVKN 416
           +P P++RD+E+ DAI VLGED+T +AARIALSLRQ+VKGKA ++A  M+V  W  AAV+ 
Sbjct: 361 VPTPSLRDMEEADAILVLGEDVTMSAARIALSLRQAVKGKARELARKMKVDLWQVAAVQT 420

Query: 417 IGQHALNPLFIASLAETKLDDIAEECVHAAPDDLARIGFAVAHALDASAPAVEGLDTEAV 476
           +GQ+   PL I SL  T+LDD+ E+ +HA   D AR+GFA+A+ LD +APAV  L  E  
Sbjct: 421 LGQNQRYPLLITSLDTTRLDDVVEDKLHAPYADQARLGFAIANLLDPAAPAVTDLGAEQQ 480

Query: 477 ELAQRIADALLAAKRPLIIAGTSLGSKALIEAAANIAKALKLRDKNGSISLVVPEANSLG 536
             A R A+ L  AK+PLIIAG+S  S ALIEAA+NIA+ALK R    SI+LV  EANSLG
Sbjct: 481 AQAARWAELLGNAKKPLIIAGSSARSMALIEAASNIARALKGRGLEASIALVGQEANSLG 540

Query: 537 LAMLGGES--LDAALQAVIDGKADAIVVLENDLYTRTDAAKVDAALDAAKVLIVADHQKT 594
           LAML   S  L+AAL+ +   +  A+V +ENDLY R    +VDAAL   + L+V DHQ T
Sbjct: 541 LAMLASTSQPLEAALERIEAEEGLALVTVENDLYRRAARNRVDAALARLQHLLVIDHQAT 600

Query: 595 ATSDRAHLVLPAATFAEGDGTLVSQEGRAQRFFQVFDPKYMDASILVHEGWRWLHALRST 654
           +T+ +A LVLPAA+FAE DGTLV+ EGRAQRFFQV+ P + +A I V EGWRWL AL+ T
Sbjct: 601 STAQKADLVLPAASFAETDGTLVNMEGRAQRFFQVYAPAFYNADIQVREGWRWLAALQGT 660

Query: 655 LLNQPIDWTQLDHVTAAAAASAPQLARIVDAAPSAAFRIKGMKLAREPLRYSGRTAMRAD 714
           L ++P+ W   D ++ A AAS P LA +++AAP+A  RI+GM+LAREP RYSGRT+M A+
Sbjct: 661 LEHKPLRWQTFDEISHACAASVPLLATMLEAAPNAGLRIRGMRLAREPHRYSGRTSMLAN 720

Query: 715 ISVHEPRTPQDNDTAFAFSMEGYSGSAEPRQQVPFAWSPGWNSPQAWNKFQDEVGGHIRA 774
            +V EPR  QD D+ F FSMEGY+GS +   QVPFAW+PGWNSP AWNKFQDEVGGH+RA
Sbjct: 721 QNVSEPRVAQDPDSPFNFSMEGYAGSRQDMPQVPFAWAPGWNSPSAWNKFQDEVGGHLRA 780

Query: 775 GDPGTRLIETQGDSLNWFAAVPRPFNPAQGTWQVVPFFHLFGSEETSSKAAPVQERIPTA 834
           GDPG RL+E   D+L+WF+A+P PF  A    QVV +  LFG EE S+++  +Q R+   
Sbjct: 781 GDPGRRLLEATADTLDWFSAIPAPFKTADAL-QVVNYAQLFGGEELSARSPVIQARMSEP 839

Query: 835 YVSVAKSEADRLGVNDGALLSLNVAGQTLRLPLRINDELGAGLVALPKGLAGIPPAIFGK 894
            + +   +A R  + +G L++ +  G   RLPLR++ +L  GLV LP G++G+P A+   
Sbjct: 840 MLVLNPHDAARFALVEGGLVAFSWGGNHWRLPLRLSKKLSQGLVGLPLGVSGLPTALHQA 899

Query: 895 TVDGLQEA 902
            +  LQEA
Sbjct: 900 YLANLQEA 907